RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 ARPP19P56211 112 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 HELBQ8NG08 1087 aaPredicted RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 NAPGQ99747 312 aaPredicted RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 METAP2P50579 478 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDH8-203ENST00000577390 VCPP55072 806 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 CHMP1BQ7LBR1 199 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDH8-203ENST00000577390 PAWRQ96IZ0 340 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 LARSQ9P2J5 1176 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 ARHGAP4P98171 946 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 RRAGBQ5VZM2 374 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 RRP36Q96EU6 259 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 TEX12Q9BXU0 123 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 CSADQ9Y600 493 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 LMNB2Q03252 620 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 ELMOD1Q8N336 334 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 HACD3Q9P035 362 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 LMNAP02545 664 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 NME8Q8N427 588 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 RNF10Q8N5U6 811 aaKnown RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 IQSEC3Q9UPP2 1182 aaPredicted RBP9.67□□□□□ -0.86
CDH8-203ENST00000577390 FHOD1Q9Y613 1164 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 RASSF10A6NK89 507 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 TBC1D8O95759 1140 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 E2F5Q15329 346 aa9.67□□□□□ -0.86
CDH8-203ENST00000577390 DDAH1O94760 285 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 ZNF653Q96CK0 615 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 EIF2AQ9BY44 585 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 GSTA4O15217 222 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 HMGB3O15347 200 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 IFT88Q13099 833 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 NUDCD3Q8IVD9 361 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 RPAP2Q8IXW5 612 aaPredicted RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 ZFP42Q96MM3 310 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 CD19P15391 556 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 PAMP19021 973 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 HNRNPH1P31943 449 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 TRIM60Q495X7 471 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 LGSNQ5TDP6 509 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 SH2D4AQ9H788 454 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 HPDP32754 393 aaPredicted RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 HAND2P61296 217 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 ALDH1L2Q3SY69 923 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 GADL1Q6ZQY3 521 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 RSRC2Q7L4I2 434 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 TDRD7Q8NHU6 1098 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 ATG3Q9NT62 314 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 IFNKQ9P0W0 207 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 H3BRJ5 948 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 CAPN15O75808 1086 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 RPSAP08865 295 aaKnown RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 MUM1Q2TAK8 710 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 TRIM59Q8IWR1 403 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 FSIP1Q8NA03 581 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 POLR3CQ9BUI4 534 aaPredicted RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 C6orf203Q9P0P8 240 aaPredicted RBP9.66□□□□□ -0.86
CDH8-203ENST00000577390 SH3BP1Q9Y3L3 701 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 TMED1Q13445 227 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 RINLQ6ZS11 566 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 LRGUKQ96M69 825 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 EPAS1Q99814 870 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 PHBP35232 272 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 TRIM74Q86UV6 250 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 TRIM73Q86UV7 250 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 IQUBQ8NA54 791 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 GLG1Q92896 1179 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 ZKSCAN3Q9BRR0 538 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 OSBPL10Q9BXB5 764 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 TRIM8Q9BZR9 551 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 CLASP1Q7Z460 1538 aa9.66□□□□□ -0.86
CDH8-203ENST00000577390 GLRX3O76003 335 aaKnown RBP9.65□□□□□ -0.86
CDH8-203ENST00000577390 EPB41P11171 864 aaKnown RBP9.65□□□□□ -0.86
CDH8-203ENST00000577390 RAPH1Q70E73 1250 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 CENPKQ9BS16 269 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 SCYL2Q6P3W7 929 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 CLTAP09496 248 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 LDHAL6AQ6ZMR3 332 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH8-203ENST00000577390 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 TRPC5Q9UL62 973 aaPredicted RBP9.65□□□□□ -0.86
CDH8-203ENST00000577390 SORBS3O60504 671 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 PIK3C2GO75747 1445 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 MSL3Q8N5Y2 521 aaKnown RBP9.65□□□□□ -0.86
CDH8-203ENST00000577390 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 YIPF3Q9GZM5 350 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 DIAPH2O60879 1101 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 LMNB1P20700 586 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 RSBN1LQ6PCB5 846 aaPredicted RBP9.65□□□□□ -0.86
CDH8-203ENST00000577390 RABEP2Q9H5N1 569 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 M0R2C6 588 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 DPYSL4O14531 572 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 TEX28O15482 410 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 OPHN1O60890 802 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 PDCLQ13371 301 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 TMTC1Q8IUR5 882 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms