RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ZNF214Q9UL59 606 aaPredicted RBP18.34■□□□□ 0.53
SF3B3-215ENST00000577085 MYH4Q9Y623 1939 aa18.33■□□□□ 0.53
SF3B3-215ENST00000577085 TMEM232C9JQI7 657 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 ORC4O43929 436 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 COBLO75128 1261 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 STAT2P52630 851 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 HAND2P61296 217 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 RNF41Q9H4P4 317 aaPredicted RBP18.33■□□□□ 0.52
SF3B3-215ENST00000577085 MTMR7Q9Y216 660 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.52
SF3B3-215ENST00000577085 ZNF213O14771 459 aa18.32■□□□□ 0.52
SF3B3-215ENST00000577085 NMT2O60551 498 aa18.32■□□□□ 0.52
SF3B3-215ENST00000577085 PCP11498 1178 aaKnown RBP18.32■□□□□ 0.52
SF3B3-215ENST00000577085 MCCP23508 829 aa18.32■□□□□ 0.52
SF3B3-215ENST00000577085 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
SF3B3-215ENST00000577085 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
SF3B3-215ENST00000577085 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
SF3B3-215ENST00000577085 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
SF3B3-215ENST00000577085 PGK2P07205 417 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 FDX1P10109 184 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 LHX8Q68G74 356 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 SLC38A10Q9HBR0 1119 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
SF3B3-215ENST00000577085 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
SF3B3-215ENST00000577085 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
SF3B3-215ENST00000577085 CYBAP13498 195 aa18.3■□□□□ 0.52
SF3B3-215ENST00000577085 OAZ1P54368 228 aa18.3■□□□□ 0.52
SF3B3-215ENST00000577085 CCDC96Q2M329 555 aa18.3■□□□□ 0.52
SF3B3-215ENST00000577085 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
SF3B3-215ENST00000577085 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
SF3B3-215ENST00000577085 FBXO40Q9UH90 709 aa18.3■□□□□ 0.52
SF3B3-215ENST00000577085 ATP2A1O14983 1001 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 MYCNP04198 464 aaPredicted RBP18.29■□□□□ 0.52
SF3B3-215ENST00000577085 FGRP09769 529 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 RCSD1Q6JBY9 416 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 KCTD1Q719H9 257 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 ANKRD35Q8N283 1001 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 ESR2Q92731 530 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
SF3B3-215ENST00000577085 DIS3Q9Y2L1 958 aaKnown RBP18.29■□□□□ 0.52
SF3B3-215ENST00000577085 SEPT4O43236 478 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 TOP1P11387 765 aaKnown RBP18.28■□□□□ 0.52
SF3B3-215ENST00000577085 IMMTQ16891 758 aaKnown RBP18.28■□□□□ 0.52
SF3B3-215ENST00000577085 TTC22Q5TAA0 569 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 C7orf61Q8IZ16 206 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 DCAF4Q8WV16 495 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 COLQQ9Y215 455 aaPredicted RBP18.28■□□□□ 0.52
SF3B3-215ENST00000577085 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 RIPK3Q9Y572 518 aa18.28■□□□□ 0.52
SF3B3-215ENST00000577085 PDE4AP27815 886 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 ZNF792Q3KQV3 632 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 HABP4Q5JVS0 413 aaKnown RBP18.27■□□□□ 0.52
SF3B3-215ENST00000577085 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 TRPV1Q8NER1 839 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 CHST13Q8NET6 341 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 RUFY2Q8WXA3 655 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 TCP11L1Q9NUJ3 509 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 TACC3Q9Y6A5 838 aa18.27■□□□□ 0.52
SF3B3-215ENST00000577085 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 NT5C2P49902 561 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
SF3B3-215ENST00000577085 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 TBC1D10CQ8IV04 446 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 TMEM47Q9BQJ4 181 aa18.26■□□□□ 0.51
SF3B3-215ENST00000577085 SENP6Q9GZR1 1112 aaPredicted RBP18.26■□□□□ 0.51
SF3B3-215ENST00000577085 DNM1LO00429 736 aa18.25■□□□□ 0.51
SF3B3-215ENST00000577085 PLA2G6O60733 806 aa18.25■□□□□ 0.51
SF3B3-215ENST00000577085 TTC14Q96N46 770 aa18.25■□□□□ 0.51
SF3B3-215ENST00000577085 ACAD9Q9H845 621 aa18.25■□□□□ 0.51
SF3B3-215ENST00000577085 IGHA2P01877 340 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 RARBP10826 455 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 GSPT1P15170 499 aaKnown RBP18.24■□□□□ 0.51
SF3B3-215ENST00000577085 NOVP48745 357 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 MSL3Q8N5Y2 521 aaKnown RBP18.24■□□□□ 0.51
SF3B3-215ENST00000577085 AGBL1Q96MI9 1066 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 GPCPD1Q9NPB8 672 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 PRR12Q9ULL5 1215 aa18.24■□□□□ 0.51
SF3B3-215ENST00000577085 PFASO15067 1338 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 NEDD4P46934 1319 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 FRMPD2Q68DX3 1309 aaPredicted RBP18.23■□□□□ 0.51
SF3B3-215ENST00000577085 RAD50Q92878 1312 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 KDM4AO75164 1064 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 COL6A1P12109 1028 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 ALAS1P13196 640 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 TKFCQ3LXA3 575 aa18.23■□□□□ 0.51
SF3B3-215ENST00000577085 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms