RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 IKQ13123 557 aaPredicted RBP9.93□□□□□ -0.82
PRPF8-213ENST00000576407 BTNL9Q6UXG8 535 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 CATSPERGQ6ZRH7 1159 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 TMTC3Q6ZXV5 915 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 ANKRD23Q86SG2 305 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 NBPF11Q86T75 865 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
PRPF8-213ENST00000576407 FAM43AQ8N2R8 423 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 CHURC1Q8WUH1 139 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 GTF3C6Q969F1 213 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 PKNOX2Q96KN3 472 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 FBXO28Q9NVF7 368 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 FEM1BQ9UK73 627 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 PDHXO00330 501 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 IGF2BP3O00425 579 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 CPLX1O14810 134 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 DHX16O60231 1041 aaKnown RBP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 TM4SF4P48230 202 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 FUT2Q10981 343 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 PABPC4Q13310 644 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 COG2Q14746 738 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 NTRK3Q16288 839 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SLC35G1Q2M3R5 365 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SYDE2Q5VT97 1194 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SAMD1Q6SPF0 538 aaPredicted RBP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 FAM160B2Q86V87 743 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 HSCBQ8IWL3 235 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 ADGRF4Q8IZF3 695 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 CCDC82Q8N4S0 544 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SRBD1Q8N5C6 995 aaKnown RBP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 PRPF38AQ8NAV1 312 aaKnown RBP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SLF1Q9BQI6 1058 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 LZTS2Q9BRK4 669 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SPZ1Q9BXG8 430 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 ASCC2Q9H1I8 757 aaPredicted RBP9.92□□□□□ -0.82
PRPF8-213ENST00000576407 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 SLC45A1Q9Y2W3 748 aa9.92□□□□□ -0.82
PRPF8-213ENST00000576407 PARP14Q460N5 1801 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 MYPNQ86TC9 1320 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
PRPF8-213ENST00000576407 CYTH3O43739 400 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 CYP2C8P10632 490 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 IFNAR1P17181 557 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 OSBPP22059 807 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 SMARCA1P28370 1054 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 MAP2K2P36507 400 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 IRX3P78415 501 aaPredicted RBP9.91□□□□□ -0.82
PRPF8-213ENST00000576407 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
PRPF8-213ENST00000576407 ATG4CQ96DT6 458 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 P2RX7Q99572 595 aaKnown RBP9.91□□□□□ -0.82
PRPF8-213ENST00000576407 RIOX1Q9H6W3 641 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 JMJD4Q9H9V9 463 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 VAT1LQ9HCJ6 419 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 ZCCHC17Q9NP64 241 aaKnown RBP9.91□□□□□ -0.82
PRPF8-213ENST00000576407 HOXC10Q9NYD6 342 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 PPP1R9AQ9ULJ8 1098 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 THSD7BQ9C0I4 1608 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 RLFQ13129 1914 aa9.91□□□□□ -0.82
PRPF8-213ENST00000576407 CNTNAP5Q8WYK1 1306 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 VWA5AO00534 786 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 DTNBO60941 627 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 PPFIA3O75145 1194 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 DSG3P32926 999 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 SNAP25P60880 206 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 HERVK_113P62684 666 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 CUL4AQ13619 759 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 OTUD7BQ6GQQ9 843 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 CPLX2Q6PUV4 134 aaKnown RBP9.9□□□□□ -0.82
PRPF8-213ENST00000576407 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 PHKBQ93100 1093 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 ADAMTS5Q9UNA0 930 aa9.9□□□□□ -0.82
PRPF8-213ENST00000576407 hCG_1642624A0A1W2PR95 340 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 PTPDC1A2A3K4 754 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 ZBTB5O15062 677 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 CDKL5O76039 1030 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 FDX1P10109 184 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 BECN1Q14457 450 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 CDC37Q16543 378 aaPredicted RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 LBX2Q6XYB7 198 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 NSUN7Q8NE18 718 aaKnown RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 SMCR8Q8TEV9 937 aaPredicted RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 PIBF1Q8WXW3 757 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 MTMR8Q96EF0 704 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 RRP36Q96EU6 259 aaKnown RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 PIGSQ96S52 555 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 PARK7Q99497 189 aaKnown RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 LLPHQ9BRT6 129 aaKnown RBP9.89□□□□□ -0.83
PRPF8-213ENST00000576407 SLC26A6Q9BXS9 759 aa9.89□□□□□ -0.83
PRPF8-213ENST00000576407 RNF26Q9BY78 433 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms