RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 TEX13BQ9BXU2 312 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 HMX1Q9NP08 348 aaPredicted RBP17.95■□□□□ 0.46
SMG6-220ENST00000576218 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 KIAA0100Q14667 2235 aaKnown RBP17.95■□□□□ 0.46
SMG6-220ENST00000576218 PRKAR2AP13861 404 aaKnown RBP17.94■□□□□ 0.46
SMG6-220ENST00000576218 GRB14Q14449 540 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 BMP2KLQ5H9B9 411 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 RALYLQ86SE5 291 aaKnown RBP17.94■□□□□ 0.46
SMG6-220ENST00000576218 RIOX2Q8IUF8 465 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 DCAF4Q8WV16 495 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 MMP19Q99542 508 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 KAT14Q9H8E8 782 aa17.94■□□□□ 0.46
SMG6-220ENST00000576218 TFRCP02786 760 aaKnown RBP17.93■□□□□ 0.46
SMG6-220ENST00000576218 GJB1P08034 283 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 PTH1RQ03431 593 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 CCL14Q16627 93 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 RCSD1Q6JBY9 416 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 U2AF1L4Q8WU68 220 aaKnown RBP17.93■□□□□ 0.46
SMG6-220ENST00000576218 TTC14Q96N46 770 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 DEFB118Q96PH6 123 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMG6-220ENST00000576218 RAVER2Q9HCJ3 691 aaKnown RBP17.93■□□□□ 0.46
SMG6-220ENST00000576218 ADAMTS5Q9UNA0 930 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 RLFQ13129 1914 aa17.93■□□□□ 0.46
SMG6-220ENST00000576218 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
SMG6-220ENST00000576218 RBBP6Q7Z6E9 1792 aaKnown RBP17.92■□□□□ 0.46
SMG6-220ENST00000576218 FDX1P10109 184 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 TRIM32Q13049 653 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 USP6NLQ92738 828 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 ZSCAN10Q96SZ4 725 aaPredicted RBP17.92■□□□□ 0.46
SMG6-220ENST00000576218 ANO2Q9NQ90 1003 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 ZNF214Q9UL59 606 aaPredicted RBP17.92■□□□□ 0.46
SMG6-220ENST00000576218 PLXNB2O15031 1838 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 PARP14Q460N5 1801 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 CENPFP49454 3210 aa17.92■□□□□ 0.46
SMG6-220ENST00000576218 COL11A1P12107 1806 aaPredicted RBP17.91■□□□□ 0.46
SMG6-220ENST00000576218 ERICH2A1L162 156 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 GJA8P48165 433 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 CCDC174Q6PII3 467 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 RASGRP2Q7LDG7 609 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 ABRAQ8N0Z2 381 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 DDX11Q96FC9 970 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 SLC38A10Q9HBR0 1119 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 GPCPD1Q9NPB8 672 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 HOMER2Q9NSB8 354 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 TNKSO95271 1327 aa17.91■□□□□ 0.46
SMG6-220ENST00000576218 CDC45O75419 566 aa17.9■□□□□ 0.46
SMG6-220ENST00000576218 CNGA1P29973 690 aa17.9■□□□□ 0.46
SMG6-220ENST00000576218 OAZ1P54368 228 aa17.9■□□□□ 0.46
SMG6-220ENST00000576218 DGKHQ86XP1 1220 aa17.9■□□□□ 0.46
SMG6-220ENST00000576218 REPS2Q8NFH8 660 aa17.9■□□□□ 0.46
SMG6-220ENST00000576218 FBXO40Q9UH90 709 aa17.9■□□□□ 0.46
SMG6-220ENST00000576218 RBM8AQ9Y5S9 174 aaKnown RBP17.9■□□□□ 0.46
SMG6-220ENST00000576218 SGPL1O95470 568 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 PGK2P07205 417 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 CYP21A2P08686 494 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 HOXC6P09630 235 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 NOVP48745 357 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
SMG6-220ENST00000576218 SART3Q15020 963 aaKnown RBP17.89■□□□□ 0.45
SMG6-220ENST00000576218 IFIT1BQ5T764 474 aaKnown RBP17.89■□□□□ 0.45
SMG6-220ENST00000576218 ANKRD35Q8N283 1001 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 PNMA1Q8ND90 353 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 NCOA7Q8NI08 942 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 NPLOC4Q8TAT6 608 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 ZSWIM5Q9P217 1185 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 PRR12Q9ULL5 1215 aa17.89■□□□□ 0.45
SMG6-220ENST00000576218 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
SMG6-220ENST00000576218 PLA2G6O60733 806 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 FARP2O94887 1054 aaPredicted RBP17.88■□□□□ 0.45
SMG6-220ENST00000576218 PDHBP11177 359 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 CYP2C19P33261 490 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 SLC16A2P36021 539 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 SNAP25P60880 206 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 SYDE2Q5VT97 1194 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 PAK6Q9NQU5 681 aaPredicted RBP17.88■□□□□ 0.45
SMG6-220ENST00000576218 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 ZNF236Q9UL36 1845 aa17.88■□□□□ 0.45
SMG6-220ENST00000576218 ATP2A1O14983 1001 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 COBLO75128 1261 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 ALAS1P13196 640 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 GPATCH4Q5T3I0 446 aaKnown RBP17.87■□□□□ 0.45
SMG6-220ENST00000576218 OLFML2BQ68BL8 750 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 TTBK2Q6IQ55 1244 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 ENAHQ8N8S7 591 aaPredicted RBP17.87■□□□□ 0.45
SMG6-220ENST00000576218 CHST13Q8NET6 341 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 MAP4K1Q92918 833 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 SHISA4Q96DD7 197 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 ACAD9Q9H845 621 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 RNF146Q9NTX7 359 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 FLRT1Q9NZU1 646 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 CCPG1Q9ULG6 757 aa17.87■□□□□ 0.45
SMG6-220ENST00000576218 E7EWF7 191 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 IFIT3O14879 490 aaKnown RBP17.86■□□□□ 0.45
SMG6-220ENST00000576218 GOLGA8HP0CJ92 632 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 CAPN2P17655 700 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 CCND3P30281 292 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms