RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.19
SCARF1-209ENST00000576012 GREM2Q9H772 168 aa16.27■□□□□ 0.19
SCARF1-209ENST00000576012 BUB1O43683 1085 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-209ENST00000576012 AARSP49588 968 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCARF1-209ENST00000576012 PPFIA1Q13136 1202 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 WDR59Q6PJI9 974 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 ZNF654Q8IZM8 581 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
SCARF1-209ENST00000576012 MTRQ99707 1265 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-209ENST00000576012 ADAMTS3O15072 1205 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 EIF3HO15372 352 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCARF1-209ENST00000576012 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
SCARF1-209ENST00000576012 PDE6BP35913 854 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-209ENST00000576012 IFT88Q13099 833 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 RASGRP4Q8TDF6 673 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 CCDC51Q96ER9 411 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 GSDMAQ96QA5 445 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 PPANQ9NQ55 473 aaKnown RBP16.25■□□□□ 0.19
SCARF1-209ENST00000576012 ZNHIT6Q9NWK9 470 aaKnown RBP16.25■□□□□ 0.19
SCARF1-209ENST00000576012 CAPN6Q9Y6Q1 641 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 ITGA6P23229 1130 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 TTMPQ5BVD1 217 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 SPATA20Q8TB22 786 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-209ENST00000576012 MYH8P13535 1937 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 N4BP2Q86UW6 1770 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-209ENST00000576012 KIF5AQ12840 1032 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 HPS3Q969F9 1004 aa16.25■□□□□ 0.19
SCARF1-209ENST00000576012 TBC1D8BQ0IIM8 1120 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 MB21D1Q8N884 522 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 ABCF2Q9UG63 623 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-209ENST00000576012 PSMD14O00487 310 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 HSF2BPO75031 334 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 KRT2P35908 639 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 CKAP4Q07065 602 aaKnown RBP16.24■□□□□ 0.19
SCARF1-209ENST00000576012 TRADDQ15628 312 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 LCORLQ8N3X6 602 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 CCDC43Q96MW1 224 aaKnown RBP16.24■□□□□ 0.19
SCARF1-209ENST00000576012 FAM207AQ9NSI2 230 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-209ENST00000576012 MAGEC2Q9UBF1 373 aaPredicted RBP16.24■□□□□ 0.19
SCARF1-209ENST00000576012 FAM184BQ9ULE4 1060 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 NFU1Q9UMS0 254 aa16.24■□□□□ 0.19
SCARF1-209ENST00000576012 TUBBP07437 444 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 MCM3P25205 808 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 NNTQ13423 1086 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCARF1-209ENST00000576012 MYO1AQ9UBC5 1043 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 GRIN2DO15399 1336 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 MRC1P22897 1456 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
SCARF1-209ENST00000576012 FAM153BP0C7A2 387 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 ATP6V1AP38606 617 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 FAM153CQ494X1 144 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 SGMS1Q86VZ5 419 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 CCDC42Q96M95 316 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
SCARF1-209ENST00000576012 FAM153AQ9UHL3 310 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 SCP2P22307 547 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 MTIF2P46199 727 aaKnown RBP16.23■□□□□ 0.19
SCARF1-209ENST00000576012 TUBB4BP68371 445 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 E2F5Q15329 346 aa16.23■□□□□ 0.19
SCARF1-209ENST00000576012 SUGP1Q8IWZ8 645 aaKnown RBP16.23■□□□□ 0.19
SCARF1-209ENST00000576012 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
SCARF1-209ENST00000576012 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
SCARF1-209ENST00000576012 STAT6P42226 847 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 MAATS1Q7Z4T9 603 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 C2CD5Q86YS7 1000 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 IRF2BP1Q8IU81 584 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 GIMAP7Q8NHV1 300 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 ZIM3Q96PE6 472 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 KRT83P78385 493 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 SPA17Q15506 151 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
SCARF1-209ENST00000576012 SPATA4Q8NEY3 305 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 SUFUQ9UMX1 484 aa16.22■□□□□ 0.19
SCARF1-209ENST00000576012 PACSIN2Q9UNF0 486 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-209ENST00000576012 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-209ENST00000576012 MED1Q15648 1581 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-209ENST00000576012 CYLC1P35663 651 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-209ENST00000576012 NLRP5P59047 1200 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 E7EVH7 732 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 XBP1P17861 261 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 CARSP49589 748 aaKnown RBP16.21■□□□□ 0.19
SCARF1-209ENST00000576012 RWDD2AQ9UIY3 292 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 TNKSO95271 1327 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 LIFRP42702 1097 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 GUCY2DQ02846 1103 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms