RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 GUCY2DQ02846 1103 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 TSC22D1Q15714 1073 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 BBOF1Q8ND07 529 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 TBC1D23Q9NUY8 699 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 NOC2LQ9Y3T9 749 aaKnown RBP11.51□□□□□ -0.57
USP6-206ENST00000575709 E2F6O75461 281 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ARHGAP18Q8N392 663 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
USP6-206ENST00000575709 WDR91A4D1P6 747 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 SH3BP5LQ7L8J4 393 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 KLHL31Q9H511 634 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ATF7P17544 494 aaPredicted RBP11.51□□□□□ -0.57
USP6-206ENST00000575709 KLHL30Q0D2K2 578 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ANGPT1Q15389 498 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 SNRNP27Q8WVK2 155 aaKnown RBP11.51□□□□□ -0.57
USP6-206ENST00000575709 POLR2DO15514 142 aaKnown RBP11.51□□□□□ -0.57
USP6-206ENST00000575709 DEAF1O75398 565 aaPredicted RBP11.51□□□□□ -0.57
USP6-206ENST00000575709 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 SLC30A9Q6PML9 568 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 B4GALNT2Q8NHY0 566 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 CARD9Q9H257 536 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ATP6V0A4Q9HBG4 840 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ITKQ08881 620 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 PAK1Q13153 545 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 ITM2BQ9Y287 266 aa11.51□□□□□ -0.57
USP6-206ENST00000575709 EFCAB14O75071 495 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 GUCY1A3Q02108 690 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 ANGPTL8Q6UXH0 198 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 TRIM42Q8IWZ5 723 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 MAPK13O15264 365 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 TOM1L1O75674 476 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
USP6-206ENST00000575709 TMED2Q15363 201 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 RAB44Q7Z6P3 723 aaPredicted RBP11.5□□□□□ -0.57
USP6-206ENST00000575709 C2CD5Q86YS7 1000 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 MCF2L2Q86YR7 1114 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 ZGPATQ8N5A5 531 aaKnown RBP11.5□□□□□ -0.57
USP6-206ENST00000575709 MYO1CO00159 1063 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 CUL3Q13618 768 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 DESI2Q9BSY9 194 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 SNRKQ9NRH2 765 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 TBK1Q9UHD2 729 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 CFAP65Q6ZU64 1925 aaKnown RBP11.5□□□□□ -0.57
USP6-206ENST00000575709 HDAC1Q13547 482 aaPredicted RBP11.5□□□□□ -0.57
USP6-206ENST00000575709 IQCB1Q15051 598 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 BRD8Q9H0E9 1235 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 CXorf56Q9H5V9 222 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 CABP5Q9NP86 173 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 GYG2O15488 501 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
USP6-206ENST00000575709 SNX29Q8TEQ0 813 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 AATFQ9NY61 560 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP6-206ENST00000575709 ARHGAP26Q9UNA1 814 aa11.5□□□□□ -0.57
USP6-206ENST00000575709 ZMYND10O75800 440 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 ABCB4P21439 1286 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 MFSD4BQ5TF39 518 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 MYLK4Q86YV6 388 aaPredicted RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 EIF3CQ99613 913 aaKnown RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 GINS4Q9BRT9 223 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SBNO1A3KN83 1393 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SOGA1O94964 1423 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 F6X3S4 739 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 RASGRF2O14827 1237 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 BCRP11274 1271 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SCG2P13521 617 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 LVRNQ6Q4G3 990 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 CCDC103Q8IW40 242 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 TTC1Q99614 292 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 TAB2Q9NYJ8 693 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 AP2B1P63010 937 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 PGBD1Q96JS3 809 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 FGFR1OP2Q9NVK5 253 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 ESRRBO95718 433 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SLC9A1P19634 815 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SP4Q02446 784 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 RRAGAQ7L523 313 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 CDH24Q86UP0 819 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP6-206ENST00000575709 PRDM1O75626 825 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 BAG3O95817 575 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 CCDC149Q6ZUS6 474 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 LUZP2Q86TE4 346 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 CASP10Q92851 521 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 NCLNQ969V3 563 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
USP6-206ENST00000575709 SMAPO00193 183 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 OTUD6AQ7L8S5 288 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 HOOK2Q96ED9 719 aa11.49□□□□□ -0.57
USP6-206ENST00000575709 SBNO2Q9Y2G9 1366 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms