RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 UHRF1Q96T88 793 aaPredicted RBP10.83□□□□□ -0.68
SMG6-218ENST00000575454 SEZ6LQ9BYH1 1024 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMG6-218ENST00000575454 ABHD16BQ9H3Z7 469 aa10.83□□□□□ -0.68
SMG6-218ENST00000575454 ZHX1Q9UKY1 873 aaPredicted RBP10.83□□□□□ -0.68
SMG6-218ENST00000575454 CTDP1Q9Y5B0 961 aaPredicted RBP10.83□□□□□ -0.68
SMG6-218ENST00000575454 CHD9Q3L8U1 2897 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 TCRBV5S4A2TA0A5A2 114 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 ARVCFO00192 962 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 ATP2A1O14983 1001 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 RAD21O60216 631 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 ZBED4O75132 1171 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 IFIT2P09913 472 aaKnown RBP10.82□□□□□ -0.68
SMG6-218ENST00000575454 C6orf222P0C671 652 aaPredicted RBP10.82□□□□□ -0.68
SMG6-218ENST00000575454 CSF2RAP15509 400 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 GJA9P57773 515 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 CEP85Q6P2H3 762 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 C16orf59Q7L2K0 433 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
SMG6-218ENST00000575454 REPS2Q8NFH8 660 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 SLF1Q9BQI6 1058 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 C1QTNF1Q9BXJ1 281 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 PRDM12Q9H4Q4 367 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 ARMT1Q9H993 441 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 SLC28A3Q9HAS3 691 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 FBXO40Q9UH90 709 aa10.82□□□□□ -0.68
SMG6-218ENST00000575454 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 USP17L21D6R901 530 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 APBB1O00213 710 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 CABYRO75952 493 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 MBD4O95243 580 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 SNAI1O95863 264 aaPredicted RBP10.81□□□□□ -0.68
SMG6-218ENST00000575454 FGBP02675 491 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 ASGR1P07306 291 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 IGFBP4P22692 258 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 EVX2Q03828 476 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 GNASQ5JWF2 1037 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 FAM83BQ5T0W9 1011 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 SNRNP48Q6IEG0 339 aaKnown RBP10.81□□□□□ -0.68
SMG6-218ENST00000575454 ZNF365Q70YC5 407 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 CLEC10AQ8IUN9 316 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 ANKRD35Q8N283 1001 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 RHPN1Q8TCX5 695 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 HERVK_113Q902F9 699 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 LENG1Q96BZ8 264 aaPredicted RBP10.81□□□□□ -0.68
SMG6-218ENST00000575454 FAM122AQ96E09 287 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 DNAJC2Q99543 621 aaKnown RBP10.81□□□□□ -0.68
SMG6-218ENST00000575454 UPF3AQ9H1J1 476 aaKnown RBP10.81□□□□□ -0.68
SMG6-218ENST00000575454 IL23AQ9NPF7 189 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 EXOC6BQ9Y2D4 811 aa10.81□□□□□ -0.68
SMG6-218ENST00000575454 DNAJC25-GNG10A0A024R161 153 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 PRKAB2O43741 272 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 ADD2P35612 726 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 PLA2G5P39877 138 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 PBX2P40425 430 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 NKX3-2P78367 333 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG6-218ENST00000575454 FAM126BQ8IXS8 530 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 CHST13Q8NET6 341 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 IL1RAPL2Q9NP60 686 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
SMG6-218ENST00000575454 CXXC1Q9P0U4 656 aaPredicted RBP10.8□□□□□ -0.68
SMG6-218ENST00000575454 MAST2Q6P0Q8 1798 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 REV3LO60673 3130 aa10.8□□□□□ -0.68
SMG6-218ENST00000575454 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 GRXCR1A8MXD5 290 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 F5H6K3 240 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 ZEB2O60315 1214 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 FDX1P10109 184 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 ACRP10323 421 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 OAZ1P54368 228 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 KLRC3Q07444 240 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 ADGRE1Q14246 886 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 UBE3CQ15386 1083 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 CCDC144BQ3MJ40 725 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
SMG6-218ENST00000575454 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 MKNK2Q9HBH9 465 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 ZNF287Q9HBT7 754 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 PAG1Q9NWQ8 432 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 NYAP2Q9P242 653 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 ARPP21Q9UBL0 812 aaPredicted RBP10.79□□□□□ -0.68
SMG6-218ENST00000575454 FEM1BQ9UK73 627 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 SYNPO2Q9UMS6 1093 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 SLC4A4Q9Y6R1 1079 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 ZNF236Q9UL36 1845 aa10.79□□□□□ -0.68
SMG6-218ENST00000575454 MYADML2A6NDP7 307 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 RAB11FIP3O75154 756 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 HMMRO75330 724 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 CD4P01730 458 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 CYP2C18P33260 490 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 CCDC85BQ15834 202 aaPredicted RBP10.78□□□□□ -0.68
SMG6-218ENST00000575454 CTR9Q6PD62 1173 aa10.78□□□□□ -0.68
SMG6-218ENST00000575454 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms