RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 XPO4Q9C0E2 1151 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 SUGCTQ9HAC7 445 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 IQGAP3Q86VI3 1631 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 TUBGCP6Q96RT7 1819 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 E7ENQ6 273 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 SMARCA1P28370 1054 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 LSP1P33241 339 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 PBX2P40425 430 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 SCTRP47872 440 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 NBPF14Q5TI25 921 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 FBXO31Q5XUX0 539 aaPredicted RBP8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF365Q70YC5 407 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 PEX5LQ8IYB4 626 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 MYCBPAPQ8TBZ2 947 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 SYTL4Q96C24 671 aaPredicted RBP8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 UBE2OQ9C0C9 1292 aaKnown RBP8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 RABEP2Q9H5N1 569 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 EXOC1Q9NV70 894 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 BAIAP2L1Q9UHR4 511 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 NPATQ14207 1427 aa8.86□□□□□ -0.99
TOM1L1-220ENST00000575333 IKBKBO14920 756 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 ALOX15P16050 662 aaPredicted RBP8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 USP14P54578 494 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 OXCT1P55809 520 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 SULT2A1Q06520 285 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 FOXD4Q12950 439 aaPredicted RBP8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 PTGISQ16647 500 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 CCDC70Q6NSX1 233 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 CATIPQ7Z7H3 387 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 ARHGEF25Q86VW2 580 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 DZIP1Q86YF9 867 aaKnown RBP8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 LRRC49Q8IUZ0 686 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 RPAP2Q8IXW5 612 aaPredicted RBP8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 ARFGAP2Q8N6H7 521 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 CCDC28BQ9BUN5 200 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 PCMTD2Q9NV79 361 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 IFNKQ9P0W0 207 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 SH3GLB1Q9Y371 365 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 CPSF1Q10570 1443 aaKnown RBP8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 TET3O43151 1660 aa8.85□□□□□ -0.99
TOM1L1-220ENST00000575333 AGPSO00116 658 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 WDR46O15213 610 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 NR1I2O75469 434 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 SSBP05455 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 RHOXF2BP0C7M4 288 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 GJB2P29033 226 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 USP11P51784 963 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 TTLL12Q14166 644 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 INAQ16352 499 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 PPP4R3AQ6IN85 833 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 IQCEQ6IPM2 695 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 FNBP4Q8N3X1 1017 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 DHTKD1Q96HY7 919 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 MAML3Q96JK9 1138 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 FGD4Q96M96 766 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 ZMAT2Q96NC0 199 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 EYA1Q99502 592 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 SH3GL1Q99961 368 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 RHOXF2Q9BQY4 288 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 NAA15Q9BXJ9 866 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 OXCT2Q9BYC2 517 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 FAM184BQ9ULE4 1060 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 ITM2BQ9Y287 266 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CCDC162PA2VCL2 907 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 USO1O60763 962 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 BAG3O95817 575 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CKAP4Q07065 602 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF268Q14587 947 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 ZMYM1Q5SVZ6 1142 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 RC3H1Q5TC82 1133 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 THOC7Q6I9Y2 204 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 GALNT17Q6IS24 598 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CACNA2D4Q7Z3S7 1137 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CCDC83Q8IWF9 413 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CFAP61Q8NHU2 1237 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 KIFAP3Q92845 792 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CCT8L2Q96SF2 557 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 NDNQ99608 321 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 IRF2BPLQ9H1B7 796 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 CFAP45Q9UL16 551 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 RABL2BQ9UNT1 228 aa8.84□□□□□ -0.99
TOM1L1-220ENST00000575333 ABCC4O15439 1325 aa8.83□□□□□ -1
TOM1L1-220ENST00000575333 USP32Q8NFA0 1604 aa8.83□□□□□ -1
TOM1L1-220ENST00000575333 VPS37CA5D8V6 355 aaPredicted RBP8.83□□□□□ -1
TOM1L1-220ENST00000575333 DPPA5A6NC42 116 aa8.83□□□□□ -1
TOM1L1-220ENST00000575333 PFDN1O60925 122 aa8.83□□□□□ -1
TOM1L1-220ENST00000575333 ARPC4P59998 168 aa8.83□□□□□ -1
TOM1L1-220ENST00000575333 MRPS25P82663 173 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms