RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 APPBP2Q92624 585 aa20.02■□□□□ 0.8
TVP23A-209ENST00000575135 CLIP2Q9UDT6 1046 aa20.02■□□□□ 0.8
TVP23A-209ENST00000575135 CNPY2Q9Y2B0 182 aa20.02■□□□□ 0.8
TVP23A-209ENST00000575135 ROBO3Q96MS0 1386 aa20.01■□□□□ 0.79
TVP23A-209ENST00000575135 RNF113AO15541 343 aaKnown RBP20.01■□□□□ 0.79
TVP23A-209ENST00000575135 ITGB8P26012 769 aa20.01■□□□□ 0.79
TVP23A-209ENST00000575135 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
TVP23A-209ENST00000575135 PRPF38AQ8NAV1 312 aaKnown RBP20.01■□□□□ 0.79
TVP23A-209ENST00000575135 DDX11Q96FC9 970 aa20.01■□□□□ 0.79
TVP23A-209ENST00000575135 DCTPP1Q9H773 170 aa20.01■□□□□ 0.79
TVP23A-209ENST00000575135 EPB41L4AQ9HCS5 686 aaPredicted RBP20.01■□□□□ 0.79
TVP23A-209ENST00000575135 TACC3Q9Y6A5 838 aa20.01■□□□□ 0.79
TVP23A-209ENST00000575135 MYH4Q9Y623 1939 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 IGKV6D-41A0A0C4DH26 115 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 A0A1W2PQ45 241 aaPredicted RBP20■□□□□ 0.79
TVP23A-209ENST00000575135 A0A1W2PQY0 241 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 GPAA1O43292 621 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 ADAMTS4O75173 837 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 PRDM1O75626 825 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 SNAI1O95863 264 aaPredicted RBP20■□□□□ 0.79
TVP23A-209ENST00000575135 CLTBP09497 229 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 CPXCR1Q8N123 301 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 GPATCH3Q96I76 525 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 CDH23Q9H251 3354 aa20■□□□□ 0.79
TVP23A-209ENST00000575135 DNAJC25-GNG10A0A024R161 153 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 M0R2C6 588 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 PQBP1O60828 265 aaKnown RBP19.99■□□□□ 0.79
TVP23A-209ENST00000575135 APPP05067 770 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 TDO2P48775 406 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
TVP23A-209ENST00000575135 MSL3Q8N5Y2 521 aaKnown RBP19.99■□□□□ 0.79
TVP23A-209ENST00000575135 MKL1Q969V6 931 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 KIFC2Q96AC6 838 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 SEMA6BQ9H3T3 888 aa19.99■□□□□ 0.79
TVP23A-209ENST00000575135 VCANP13611 3396 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 KIAA0355O15063 1070 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 ZBED4O75132 1171 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 ZFYP08048 801 aaPredicted RBP19.98■□□□□ 0.79
TVP23A-209ENST00000575135 GNAT2P19087 354 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 ACLYP53396 1101 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 EPHB4P54760 987 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 MAMDC4Q6UXC1 1216 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 CEP95Q96GE4 821 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 CDX2Q99626 313 aaPredicted RBP19.98■□□□□ 0.79
TVP23A-209ENST00000575135 TSEN34Q9BSV6 310 aaKnown RBP19.98■□□□□ 0.79
TVP23A-209ENST00000575135 RAVER2Q9HCJ3 691 aaKnown RBP19.98■□□□□ 0.79
TVP23A-209ENST00000575135 FAM184BQ9ULE4 1060 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 SYNGAP1Q96PV0 1343 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 SYNRGQ9UMZ2 1314 aa19.98■□□□□ 0.79
TVP23A-209ENST00000575135 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.97■□□□□ 0.79
TVP23A-209ENST00000575135 IFNL3Q8IZI9 196 aa19.97■□□□□ 0.79
TVP23A-209ENST00000575135 KLHDC9Q8NEP7 349 aa19.97■□□□□ 0.79
TVP23A-209ENST00000575135 SLC38A10Q9HBR0 1119 aa19.97■□□□□ 0.79
TVP23A-209ENST00000575135 ZNF287Q9HBT7 754 aa19.97■□□□□ 0.79
TVP23A-209ENST00000575135 TMEM39AQ9NV64 488 aa19.97■□□□□ 0.79
TVP23A-209ENST00000575135 MTMR4Q9NYA4 1195 aa19.97■□□□□ 0.79
TVP23A-209ENST00000575135 ZHX1Q9UKY1 873 aaPredicted RBP19.97■□□□□ 0.79
TVP23A-209ENST00000575135 CTDP1Q9Y5B0 961 aaPredicted RBP19.97■□□□□ 0.79
TVP23A-209ENST00000575135 PATL2C9JE40 543 aaKnown RBP19.96■□□□□ 0.79
TVP23A-209ENST00000575135 RAG1P15918 1043 aa19.96■□□□□ 0.79
TVP23A-209ENST00000575135 SMAD3P84022 425 aaKnown RBP19.96■□□□□ 0.79
TVP23A-209ENST00000575135 ZNF467Q7Z7K2 595 aaPredicted RBP19.96■□□□□ 0.79
TVP23A-209ENST00000575135 LRRC47Q8N1G4 583 aaKnown RBP19.96■□□□□ 0.79
TVP23A-209ENST00000575135 STARD7Q9NQZ5 370 aa19.96■□□□□ 0.79
TVP23A-209ENST00000575135 FEM1BQ9UK73 627 aa19.96■□□□□ 0.79
TVP23A-209ENST00000575135 MCM3APO60318 1980 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 TTLL1O95922 423 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 FAAP100Q0VG06 881 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 ACVR2BQ13705 512 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 KCNA10Q16322 511 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 CCSAPQ6IQ19 270 aaPredicted RBP19.95■□□□□ 0.78
TVP23A-209ENST00000575135 ANKRD33Q7Z3H0 272 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 ANKRD35Q8N283 1001 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 NUP133Q8WUM0 1156 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 TOX2Q96NM4 488 aa19.95■□□□□ 0.78
TVP23A-209ENST00000575135 SEC62Q99442 399 aaKnown RBP19.95■□□□□ 0.78
TVP23A-209ENST00000575135 TTYH1Q9H313 450 aaPredicted RBP19.95■□□□□ 0.78
TVP23A-209ENST00000575135 MYADML2A6NDP7 307 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 DCDC2CA8MYV0 355 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 DUSP11O75319 330 aaKnown RBP19.94■□□□□ 0.78
TVP23A-209ENST00000575135 IRX5P78411 483 aaPredicted RBP19.94■□□□□ 0.78
TVP23A-209ENST00000575135 SLFN13Q68D06 897 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.94■□□□□ 0.78
TVP23A-209ENST00000575135 GMCL1P1Q8NEA9 526 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 NEDD1Q8NHV4 660 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 RNPC3Q96LT9 517 aaKnown RBP19.94■□□□□ 0.78
TVP23A-209ENST00000575135 FGD4Q96M96 766 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 COL25A1Q9BXS0 654 aaPredicted RBP19.94■□□□□ 0.78
TVP23A-209ENST00000575135 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.94■□□□□ 0.78
TVP23A-209ENST00000575135 SYNPO2Q9UMS6 1093 aa19.94■□□□□ 0.78
TVP23A-209ENST00000575135 MOXD2PA6NHM9 499 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 ADCY6O43306 1168 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 TSPY3P0CV98 308 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 TSPY8P0CW00 308 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 BMP3P12645 472 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 OAZ1P54368 228 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 FPGSQ05932 587 aa19.93■□□□□ 0.78
TVP23A-209ENST00000575135 LRRFIP1Q32MZ4 808 aaKnown RBP19.93■□□□□ 0.78
TVP23A-209ENST00000575135 CCDC144BQ3MJ40 725 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms