RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 GCP02774 474 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 ELF1P32519 619 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 PRCPP42785 496 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 KLK7P49862 253 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 EPHB4P54760 987 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 IFT88Q13099 833 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 ZNF473Q8WTR7 871 aaKnown RBP16.1■□□□□ 0.17
SMG6-215ENST00000574501 ZBTB3Q9H5J0 574 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 USP54Q70EL1 1684 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 ANO9A1A5B4 782 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
SMG6-215ENST00000574501 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
SMG6-215ENST00000574501 SF3B2Q13435 895 aaKnown RBP16.1■□□□□ 0.17
SMG6-215ENST00000574501 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 ALS2CLQ60I27 953 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 RPAINQ86UA6 219 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 EPN3Q9H201 632 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 LRWD1Q9UFC0 647 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 ATXN2Q99700 1313 aaKnown RBP16.1■□□□□ 0.17
SMG6-215ENST00000574501 ZNF532Q9HCE3 1301 aa16.1■□□□□ 0.17
SMG6-215ENST00000574501 PRDM1O75626 825 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 IPO7O95373 1038 aaKnown RBP16.09■□□□□ 0.17
SMG6-215ENST00000574501 HDLBPQ00341 1268 aaKnown RBP16.09■□□□□ 0.17
SMG6-215ENST00000574501 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 CCDC13Q8IYE1 715 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 CAPN6Q9Y6Q1 641 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 PMS1P54277 932 aaKnown RBP16.09■□□□□ 0.17
SMG6-215ENST00000574501 KIF5AQ12840 1032 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 MICALCLQ6ZW33 695 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMG6-215ENST00000574501 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
SMG6-215ENST00000574501 MLXIPQ9HAP2 919 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
SMG6-215ENST00000574501 STIM2Q9P246 746 aa16.09■□□□□ 0.17
SMG6-215ENST00000574501 BCL9LQ86UU0 1499 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 LGALS16A8MUM7 142 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 NBPF26B4DH59 902 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 B4DLN1 442 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 C21orf2O43822 256 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 SSBP05455 408 aaKnown RBP eCLIP16.08■□□□□ 0.17
SMG6-215ENST00000574501 TRIM21P19474 475 aaKnown RBP16.08■□□□□ 0.17
SMG6-215ENST00000574501 NF2P35240 595 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 CCDC96Q2M329 555 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.17
SMG6-215ENST00000574501 CEP57Q86XR8 500 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 NBPF15Q8N660 670 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 CCT8L2Q96SF2 557 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 VCPKMTQ9H867 229 aa16.08■□□□□ 0.17
SMG6-215ENST00000574501 ZNF233A6NK53 670 aa16.08■□□□□ 0.16
SMG6-215ENST00000574501 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
SMG6-215ENST00000574501 PREPLQ4J6C6 727 aaPredicted RBP16.08■□□□□ 0.16
SMG6-215ENST00000574501 EMBQ6PCB8 327 aa16.08■□□□□ 0.16
SMG6-215ENST00000574501 SPATS2Q86XZ4 545 aaKnown RBP16.08■□□□□ 0.16
SMG6-215ENST00000574501 SLC40A1Q9NP59 571 aa16.08■□□□□ 0.16
SMG6-215ENST00000574501 ODF2LQ9ULJ1 636 aa16.08■□□□□ 0.16
SMG6-215ENST00000574501 MOCS3O95396 460 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 PLEKP08567 350 aaPredicted RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 FAM153BP0C7A2 387 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 WTAPQ15007 396 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 MEA1Q16626 185 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 FAM153CQ494X1 144 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 ESCO1Q5FWF5 840 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 ZNF658Q5TYW1 1059 aaPredicted RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 MIEF2Q96C03 454 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 ZNHIT6Q9NWK9 470 aaKnown RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 FAM153AQ9UHL3 310 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 ESYT3A0FGR9 886 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 CCDC189A1A4V9 331 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 A6NNZ2 444 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 ZNF263O14978 683 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 RASSF9O75901 435 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 PDHBP11177 359 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 PHKG2P15735 406 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 SMTNP53814 917 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 PTGDRQ13258 359 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 PTGISQ16647 500 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 TUBB8Q3ZCM7 444 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 KDM7AQ6ZMT4 941 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 ZNF662Q6ZS27 426 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 NLRP14Q86W24 1093 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 FNBP4Q8N3X1 1017 aaPredicted RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 PCMTD1Q96MG8 357 aaPredicted RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 PURBQ96QR8 312 aaKnown RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 OSBPL9Q96SU4 736 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
SMG6-215ENST00000574501 EPB41L4AQ9HCS5 686 aaPredicted RBP16.07■□□□□ 0.16
SMG6-215ENST00000574501 ZSCAN5CA6NGD5 496 aaPredicted RBP16.06■□□□□ 0.16
SMG6-215ENST00000574501 H7C1D1 291 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 NCK2O43639 380 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 PPP1R37O75864 691 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms