RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 CYP46A1Q9Y6A2 500 aa38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 FGD1P98174 961 aa38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 Q3C1V9 767 aa38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 TTBK2Q6IQ55 1244 aa38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 FBXL16Q8N461 479 aa38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 MGAMO43451 1857 aa38.67■■■■□ 3.78
CTDNEP1-209ENST00000574205 DDAH1O94760 285 aa38.67■■■■□ 3.78
CTDNEP1-209ENST00000574205 GOLGA8HP0CJ92 632 aa38.67■■■■□ 3.78
CTDNEP1-209ENST00000574205 PRR12Q9ULL5 1215 aa38.67■■■■□ 3.78
CTDNEP1-209ENST00000574205 CCNA1P78396 465 aa38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 ARHGEF6Q15052 776 aa38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 REPS2Q8NFH8 660 aa38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 MAP3K14Q99558 947 aa38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 UPF2Q9HAU5 1272 aaKnown RBP38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 SLC38A10Q9HBR0 1119 aa38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 SLC12A7Q9Y666 1083 aa38.66■■■■□ 3.78
CTDNEP1-209ENST00000574205 SLC16A2P36021 539 aa38.65■■■■□ 3.78
CTDNEP1-209ENST00000574205 TMEM132BQ14DG7 1078 aa38.65■■■■□ 3.78
CTDNEP1-209ENST00000574205 Q6ZUG5 572 aa38.65■■■■□ 3.78
CTDNEP1-209ENST00000574205 UPF3BQ9BZI7 483 aaKnown RBP38.65■■■■□ 3.78
CTDNEP1-209ENST00000574205 SPATC1LQ9H0A9 340 aa38.65■■■■□ 3.78
CTDNEP1-209ENST00000574205 ZBED4O75132 1171 aa38.64■■■■□ 3.78
CTDNEP1-209ENST00000574205 PSMC4P43686 418 aa38.64■■■■□ 3.78
CTDNEP1-209ENST00000574205 GRM4Q14833 912 aa38.64■■■■□ 3.78
CTDNEP1-209ENST00000574205 AGXT2Q9BYV1 514 aa38.64■■■■□ 3.78
CTDNEP1-209ENST00000574205 ARHGAP39Q9C0H5 1083 aa38.64■■■■□ 3.78
CTDNEP1-209ENST00000574205 ZSWIM8A7E2V4 1837 aa38.64■■■■□ 3.78
CTDNEP1-209ENST00000574205 FCGRTP55899 365 aa38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 SYDE2Q5VT97 1194 aa38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 NUP133Q8WUM0 1156 aa38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 C22orf23Q9BZE7 217 aa38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 MAD2L2Q9UI95 211 aa38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 ZNF214Q9UL59 606 aaPredicted RBP38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 CTDP1Q9Y5B0 961 aaPredicted RBP38.63■■■■□ 3.78
CTDNEP1-209ENST00000574205 CALM1P0DP23 149 aa38.63■■■■□ 3.77
CTDNEP1-209ENST00000574205 CALM2P0DP24 149 aa38.63■■■■□ 3.77
CTDNEP1-209ENST00000574205 CALM3P0DP25 149 aa38.63■■■■□ 3.77
CTDNEP1-209ENST00000574205 MYL10Q9BUA6 226 aa38.63■■■■□ 3.77
CTDNEP1-209ENST00000574205 PALM3A6NDB9 673 aaPredicted RBP38.62■■■■□ 3.77
CTDNEP1-209ENST00000574205 CTGFP29279 349 aa38.62■■■■□ 3.77
CTDNEP1-209ENST00000574205 CAP1Q01518 475 aa38.62■■■■□ 3.77
CTDNEP1-209ENST00000574205 PLS1Q14651 629 aa38.62■■■■□ 3.77
CTDNEP1-209ENST00000574205 ATP2A1O14983 1001 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 GNRH1P01148 92 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 APOA5Q6Q788 366 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 SYNE3Q6ZMZ3 975 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 CCAR1Q8IX12 1150 aaKnown RBP38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 STAG2Q8N3U4 1231 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 BRF1Q92994 677 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 TRIM47Q96LD4 638 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 BACH2Q9BYV9 841 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 EFCC1Q9HA90 598 aa38.61■■■■□ 3.77
CTDNEP1-209ENST00000574205 ECM2O94769 699 aaPredicted RBP38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 FMNL1O95466 1100 aaPredicted RBP38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 MAPK4P31152 587 aa38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 OAZ1P54368 228 aa38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 CTCFLQ8NI51 663 aaPredicted RBP38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 MOV10L1Q9BXT6 1211 aaKnown RBP38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 UBA5Q9GZZ9 404 aa38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 PORCNQ9H237 461 aa38.6■■■■□ 3.77
CTDNEP1-209ENST00000574205 RBM25P49756 843 aaKnown RBP38.59■■■■□ 3.77
CTDNEP1-209ENST00000574205 TEX13BQ9BXU2 312 aa38.59■■■■□ 3.77
CTDNEP1-209ENST00000574205 KLRF2D3W0D1 207 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 TNPO2O14787 897 aaKnown RBP38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 KIF5BP33176 963 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 STAT3P40763 770 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 CTU1Q7Z7A3 348 aaKnown RBP38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 RANBP17Q9H2T7 1088 aaKnown RBP38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 BRPF3Q9ULD4 1205 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 OTOP1Q7RTM1 612 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 MICU3Q86XE3 530 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 SHCBP1Q8NEM2 672 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 CPVLQ9H3G5 476 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 TRIM17Q9Y577 477 aa38.58■■■■□ 3.77
CTDNEP1-209ENST00000574205 DOCK3Q8IZD9 2030 aa38.57■■■■□ 3.76
CTDNEP1-209ENST00000574205 KLF18A0A0U1RQI7 1052 aa38.57■■■■□ 3.76
CTDNEP1-209ENST00000574205 SLC25A27O95847 323 aa38.57■■■■□ 3.76
CTDNEP1-209ENST00000574205 RIOX2Q8IUF8 465 aa38.57■■■■□ 3.76
CTDNEP1-209ENST00000574205 CPXCR1Q8N123 301 aa38.57■■■■□ 3.76
CTDNEP1-209ENST00000574205 PDRG1Q9NUG6 133 aa38.57■■■■□ 3.76
CTDNEP1-209ENST00000574205 SNRNP48Q6IEG0 339 aaKnown RBP38.56■■■■□ 3.76
CTDNEP1-209ENST00000574205 RAVER2Q9HCJ3 691 aaKnown RBP38.56■■■■□ 3.76
CTDNEP1-209ENST00000574205 ZBTB43O43298 467 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 RXRAP19793 462 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 HOXD10P28358 340 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 COPB2P35606 906 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 RCAN1P53805 252 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 APOBRQ0VD83 1088 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 ADGRF4Q8IZF3 695 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 COA7Q96BR5 231 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 MROH8Q9H579 483 aa38.55■■■■□ 3.76
CTDNEP1-209ENST00000574205 ZNF536O15090 1300 aa38.54■■■■□ 3.76
CTDNEP1-209ENST00000574205 ERCC3P19447 782 aa38.54■■■■□ 3.76
CTDNEP1-209ENST00000574205 TOB2Q14106 344 aaPredicted RBP38.54■■■■□ 3.76
CTDNEP1-209ENST00000574205 FANCBQ8NB91 859 aa38.54■■■■□ 3.76
CTDNEP1-209ENST00000574205 GNAQP50148 359 aa38.53■■■■□ 3.76
CTDNEP1-209ENST00000574205 SNAP25P60880 206 aa38.53■■■■□ 3.76
CTDNEP1-209ENST00000574205 GPR142Q7Z601 462 aa38.53■■■■□ 3.76
CTDNEP1-209ENST00000574205 RAB11FIP4Q86YS3 637 aa38.53■■■■□ 3.76
CTDNEP1-209ENST00000574205 CWC22Q9HCG8 908 aaKnown RBP38.53■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms