RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 NFIAQ12857 509 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 CDC42EP5Q6NZY7 148 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 KRBA2Q6ZNG9 492 aa18.16■□□□□ 0.5
USP43-204ENST00000573955 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
USP43-204ENST00000573955 KLRF2D3W0D1 207 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 AOC3Q16853 763 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 CCDC178Q5BJE1 867 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 TTC38Q5R3I4 469 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 GPATCH11Q8N954 259 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 TEKT1Q969V4 418 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 NAT10Q9H0A0 1025 aaKnown RBP18.15■□□□□ 0.5
USP43-204ENST00000573955 PTGS1P23219 599 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 TCP10Q12799 353 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
USP43-204ENST00000573955 EPSTI1Q96J88 318 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 SERTAD1Q9UHV2 236 aa18.15■□□□□ 0.5
USP43-204ENST00000573955 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
USP43-204ENST00000573955 ECE2O60344 883 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 AKR1B1P15121 316 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 MCM7P33993 719 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 CRKP46108 304 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 WWC2Q6AWC2 1192 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
USP43-204ENST00000573955 NLRP12P59046 1061 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
USP43-204ENST00000573955 APOBEC3HQ6NTF7 200 aaKnown RBP18.14■□□□□ 0.49
USP43-204ENST00000573955 PLA2G4DQ86XP0 818 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 FOXP4Q8IVH2 680 aaPredicted RBP18.14■□□□□ 0.49
USP43-204ENST00000573955 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
USP43-204ENST00000573955 FAM237AA0A1B0GTK4 181 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 FAM196BA6NMK8 535 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 CASQ1P31415 396 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 PTGDRQ13258 359 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 UBA5Q9GZZ9 404 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 KCNF1Q9H3M0 494 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 VWA3AA6NCI4 1184 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 PALM3A6NDB9 673 aaPredicted RBP18.13■□□□□ 0.49
USP43-204ENST00000573955 USP17L5A8MUK1 530 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
USP43-204ENST00000573955 GNAQP50148 359 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 CCDC186Q7Z3E2 898 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 CLIP2Q9UDT6 1046 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 PCDHA5Q9Y5H7 936 aa18.13■□□□□ 0.49
USP43-204ENST00000573955 DPEP1P16444 411 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 SATB1Q01826 763 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 PODNQ7Z5L7 613 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 DHX58Q96C10 678 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 SERPINB13Q9UIV8 391 aa18.12■□□□□ 0.49
USP43-204ENST00000573955 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
USP43-204ENST00000573955 OSBPL5Q9H0X9 879 aaPredicted RBP18.12■□□□□ 0.49
USP43-204ENST00000573955 A0A087X0B3 334 aa18.11■□□□□ 0.49
USP43-204ENST00000573955 TOP1P11387 765 aaKnown RBP18.11■□□□□ 0.49
USP43-204ENST00000573955 SYMPKQ92797 1274 aaKnown RBP18.11■□□□□ 0.49
USP43-204ENST00000573955 KIAA1524Q8TCG1 905 aa18.11■□□□□ 0.49
USP43-204ENST00000573955 PCDHA4Q9UN74 947 aa18.11■□□□□ 0.49
USP43-204ENST00000573955 CALML3P27482 149 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 GABPAQ06546 454 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 TUBE1Q9UJT0 475 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 SCN9AQ15858 1988 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 STXBP3O00186 592 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 RAD21O60216 631 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 LRMPQ12912 555 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 POSTNQ15063 836 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
USP43-204ENST00000573955 HHIPL2Q6UWX4 724 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 ZSCAN29Q8IWY8 852 aaPredicted RBP18.1■□□□□ 0.49
USP43-204ENST00000573955 C10orf67Q8IYJ2 551 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 ZNF579Q8NAF0 562 aaKnown RBP18.1■□□□□ 0.49
USP43-204ENST00000573955 MTMR4Q9NYA4 1195 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 PYCARDQ9ULZ3 195 aa18.1■□□□□ 0.49
USP43-204ENST00000573955 CASP1P29466 404 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 AFMP43652 599 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 NT5C2P49902 561 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 GYS2P54840 703 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 DACT2Q5SW24 774 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 ZNF397Q8NF99 534 aaPredicted RBP18.09■□□□□ 0.49
USP43-204ENST00000573955 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 PIGSQ96S52 555 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 FAM53CQ9NYF3 392 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 FOCADQ5VW36 1801 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 CCDC194A0A1B0GVG4 234 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 LMOD1P29536 600 aaPredicted RBP18.09■□□□□ 0.49
USP43-204ENST00000573955 NAPAP54920 295 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 GPCPD1Q9NPB8 672 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
USP43-204ENST00000573955 CDC25AP30304 524 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 SHMT1P34896 483 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.49
USP43-204ENST00000573955 INF2Q27J81 1249 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 STRIP1Q5VSL9 837 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 FAM43BQ6ZT52 329 aaPredicted RBP18.08■□□□□ 0.49
USP43-204ENST00000573955 STAMQ92783 540 aa18.08■□□□□ 0.49
USP43-204ENST00000573955 ZNF277Q9NRM2 450 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms