RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SYN1P17600 705 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 NMIQ13287 307 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 RRP12Q5JTH9 1297 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 CHD1LQ86WJ1 897 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 GMCL1P1Q8NEA9 526 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 FEM1BQ9UK73 627 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 TMEM232C9JQI7 657 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 FOXP2O15409 715 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 SLC1A4P43007 532 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 STAT2P52630 851 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 MKL1Q969V6 931 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 DDX11Q96FC9 970 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 SYNPO2Q9UMS6 1093 aa11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 SUPT16HQ9Y5B9 1047 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-212ENST00000573328 CCDC171Q6TFL3 1326 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 SEPT4O43236 478 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 IGHDP01880 384 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 HAND2P61296 217 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 NUCB1Q02818 461 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 CCDC96Q2M329 555 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 GJC2Q5T442 439 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 ZNF589Q86UQ0 364 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 HOMER2Q9NSB8 354 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 RANBP2P49792 3224 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 LTBP2Q14767 1821 aa11.42□□□□□ -0.58
NPLOC4-212ENST00000573328 DNM1LO00429 736 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 NMT2O60551 498 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 COL6A1P12109 1028 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 MCCP23508 829 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 ALX1Q15699 326 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 LRRC26Q2I0M4 334 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 ZNF792Q3KQV3 632 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 KCTD1Q719H9 257 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 PLEKHM2Q8IWE5 1019 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 ANKRD35Q8N283 1001 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 CHURC1Q8WUH1 139 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 TINF2Q9BSI4 451 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 SLC38A10Q9HBR0 1119 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 PCDH10Q9P2E7 1040 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 FBXO40Q9UH90 709 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 ANAPC4Q9UJX5 808 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 CNPY2Q9Y2B0 182 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 LCTP09848 1927 aa11.41□□□□□ -0.58
NPLOC4-212ENST00000573328 LRRC37A2A6NM11 1700 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 ZMYM6O95789 1325 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 ATP2A1O14983 1001 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 ORC4O43929 436 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 FGAP02671 866 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 FDX1P10109 184 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 RARBP10826 455 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 SDSP20132 328 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 TICAM2Q86XR7 235 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 XPNPEP3Q9NQH7 507 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 PRKAG2Q9UGJ0 569 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
NPLOC4-212ENST00000573328 A0A1W2PPC1 479 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 HIP1O00291 1037 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 IGHA2P01877 340 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 AKR1A1P14550 325 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 MAGEA10P43363 369 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 OAZ1P54368 228 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 MFSD6Q6ZSS7 791 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 RASGRP2Q7LDG7 609 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 OSBPL3Q9H4L5 887 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 ACAD9Q9H845 621 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 NRBP1Q9UHY1 535 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 ATP11BQ9Y2G3 1177 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
NPLOC4-212ENST00000573328 SYNGAP1Q96PV0 1343 aa11.38□□□□□ -0.59
NPLOC4-212ENST00000573328 ALAS1P13196 640 aa11.38□□□□□ -0.59
NPLOC4-212ENST00000573328 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-212ENST00000573328 RTP1P59025 263 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms