RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 CYBAP13498 195 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 CAPN2P17655 700 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 FXR1P51114 621 aaKnown RBP eCLIP13.95□□□□□ -0.18
NDE1-206ENST00000572967 FAM47AQ5JRC9 791 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 TRPV1Q8NER1 839 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 IL27Q8NEV9 243 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 SLF1Q9BQI6 1058 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 RNF41Q9H4P4 317 aaPredicted RBP13.95□□□□□ -0.18
NDE1-206ENST00000572967 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
NDE1-206ENST00000572967 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
NDE1-206ENST00000572967 ZMYND8Q9ULU4 1186 aaPredicted RBP13.95□□□□□ -0.18
NDE1-206ENST00000572967 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
NDE1-206ENST00000572967 VWA5AO00534 786 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 ZNF213O14771 459 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 COBLO75128 1261 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 ANAPC15P60006 121 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 CTDSPL2Q05D32 466 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 PDE4BQ07343 736 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 ANO1Q5XXA6 986 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 LHX8Q68G74 356 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
NDE1-206ENST00000572967 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 MMP19Q99542 508 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 IL25Q9H293 177 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 MROH8Q9H579 483 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 CLIP2Q9UDT6 1046 aa13.94□□□□□ -0.18
NDE1-206ENST00000572967 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
NDE1-206ENST00000572967 ZNF214Q9UL59 606 aaPredicted RBP13.94□□□□□ -0.18
NDE1-206ENST00000572967 F5H6K3 240 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 FGAP02671 866 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 FCER1AP12319 257 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 SYN1P17600 705 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 KLRC3Q07444 240 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 TRDNQ13061 729 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 OLFML2BQ68BL8 750 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 RIOX2Q8IUF8 465 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 MAML3Q96JK9 1138 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 USP26Q9BXU7 913 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 C22orf23Q9BZE7 217 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 CNNM2Q9H8M5 875 aa13.93□□□□□ -0.18
NDE1-206ENST00000572967 LCTP09848 1927 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 STRNO43815 780 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 SLC25A27O95847 323 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 TTLL1O95922 423 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 PGK2P07205 417 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 HSPA4P34932 840 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 PTH1RQ03431 593 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 SNRNP48Q6IEG0 339 aaKnown RBP13.92□□□□□ -0.18
NDE1-206ENST00000572967 KIFC2Q96AC6 838 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 SLC5A4Q9NY91 659 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 MTMR4Q9NYA4 1195 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 ADAMTS5Q9UNA0 930 aa13.92□□□□□ -0.18
NDE1-206ENST00000572967 TSPY2A6NKD2 308 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 MSCO60682 206 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
NDE1-206ENST00000572967 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
NDE1-206ENST00000572967 PSMA5P28066 241 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 STAT3P40763 770 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 TFAP4Q01664 338 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 KCTD2Q14681 263 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 LRRC26Q2I0M4 334 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 PRAMEF19Q5SWL8 479 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 CREB3L3Q68CJ9 461 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
NDE1-206ENST00000572967 ABRAQ8N0Z2 381 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 CPXCR1Q8N123 301 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 NEDD1Q8NHV4 660 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 ANAPC4Q9UJX5 808 aa13.91□□□□□ -0.18
NDE1-206ENST00000572967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
NDE1-206ENST00000572967 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
NDE1-206ENST00000572967 SLC27A2O14975 620 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 NMT2O60551 498 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 IGHA2P01877 340 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 COL6A1P12109 1028 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 COPB2P35606 906 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 RBM25P49756 843 aaKnown RBP13.9□□□□□ -0.18
NDE1-206ENST00000572967 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 TBC1D32Q96NH3 1257 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 KRT23Q9C075 422 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 PRO3102Q9H379 93 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
NDE1-206ENST00000572967 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 STX8Q9UNK0 236 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 TACC3Q9Y6A5 838 aa13.9□□□□□ -0.18
NDE1-206ENST00000572967 CEP290O15078 2479 aa13.89□□□□□ -0.19
NDE1-206ENST00000572967 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
NDE1-206ENST00000572967 IKQ13123 557 aaPredicted RBP13.89□□□□□ -0.19
NDE1-206ENST00000572967 TSGA10IPQ3SY00 556 aa13.89□□□□□ -0.19
NDE1-206ENST00000572967 RRP12Q5JTH9 1297 aaKnown RBP13.89□□□□□ -0.19
NDE1-206ENST00000572967 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
NDE1-206ENST00000572967 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms