RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MYH4Q9Y623 1939 aa24.31■■□□□ 1.48
CHMP6-204ENST00000572778 STRNO43815 780 aa24.31■■□□□ 1.48
CHMP6-204ENST00000572778 XRCC5P13010 732 aaKnown RBP24.31■■□□□ 1.48
CHMP6-204ENST00000572778 MLLT1Q03111 559 aaPredicted RBP24.31■■□□□ 1.48
CHMP6-204ENST00000572778 GRB14Q14449 540 aa24.31■■□□□ 1.48
CHMP6-204ENST00000572778 ZSCAN10Q96SZ4 725 aaPredicted RBP24.31■■□□□ 1.48
CHMP6-204ENST00000572778 APBA2Q99767 749 aa24.31■■□□□ 1.48
CHMP6-204ENST00000572778 A0A0G2JMZ2 1700 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 CDC45O75419 566 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 ZKSCAN1P17029 563 aaPredicted RBP24.3■■□□□ 1.48
CHMP6-204ENST00000572778 EN2P19622 333 aaPredicted RBP24.3■■□□□ 1.48
CHMP6-204ENST00000572778 CCL14Q16627 93 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 SNRNP48Q6IEG0 339 aaKnown RBP24.3■■□□□ 1.48
CHMP6-204ENST00000572778 DGKHQ86XP1 1220 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 TRMT44Q8IYL2 757 aaKnown RBP24.3■■□□□ 1.48
CHMP6-204ENST00000572778 TRIB2Q92519 343 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 TEX13BQ9BXU2 312 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 LSG1Q9H089 658 aaKnown RBP24.3■■□□□ 1.48
CHMP6-204ENST00000572778 UNC93B1Q9H1C4 597 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 RAVER2Q9HCJ3 691 aaKnown RBP24.3■■□□□ 1.48
CHMP6-204ENST00000572778 ANO2Q9NQ90 1003 aa24.3■■□□□ 1.48
CHMP6-204ENST00000572778 ADORA2AP29274 412 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 TRIM32Q13049 653 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 DPP9Q86TI2 863 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 UBAC1Q9BSL1 405 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 KAT14Q9H8E8 782 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 SLC38A10Q9HBR0 1119 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 GPCPD1Q9NPB8 672 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 TAF6LQ9Y6J9 622 aa24.29■■□□□ 1.48
CHMP6-204ENST00000572778 LAMA4Q16363 1823 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 E7EWF7 191 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 PLA2G6O60733 806 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 FDX1P10109 184 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 FCER1AP12319 257 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 COPB2P35606 906 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 RALYLQ86SE5 291 aaKnown RBP24.28■■□□□ 1.48
CHMP6-204ENST00000572778 TNKSO95271 1327 aa24.28■■□□□ 1.48
CHMP6-204ENST00000572778 FRMPD2Q68DX3 1309 aaPredicted RBP24.28■■□□□ 1.48
CHMP6-204ENST00000572778 PDHBP11177 359 aa24.27■■□□□ 1.48
CHMP6-204ENST00000572778 TTBK2Q6IQ55 1244 aa24.27■■□□□ 1.48
CHMP6-204ENST00000572778 CYB5R4Q7L1T6 521 aa24.27■■□□□ 1.48
CHMP6-204ENST00000572778 ABRAQ8N0Z2 381 aa24.27■■□□□ 1.48
CHMP6-204ENST00000572778 ENAHQ8N8S7 591 aaPredicted RBP24.27■■□□□ 1.48
CHMP6-204ENST00000572778 NPLOC4Q8TAT6 608 aa24.27■■□□□ 1.48
CHMP6-204ENST00000572778 MMP19Q99542 508 aa24.27■■□□□ 1.48
CHMP6-204ENST00000572778 ATP2A1O14983 1001 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 GJB1P08034 283 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 HOXC6P09630 235 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 SLC16A2P36021 539 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 SNAP25P60880 206 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 PNMA1Q8ND90 353 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 NCOA7Q8NI08 942 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 ANKS1AQ92625 1134 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 PRR12Q9ULL5 1215 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 RIPK3Q9Y572 518 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 DOCK3Q8IZD9 2030 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 CENPFP49454 3210 aa24.26■■□□□ 1.47
CHMP6-204ENST00000572778 COBLO75128 1261 aa24.25■■□□□ 1.47
CHMP6-204ENST00000572778 KCTD2Q14681 263 aa24.25■■□□□ 1.47
CHMP6-204ENST00000572778 STOX1Q6ZVD7 989 aa24.25■■□□□ 1.47
CHMP6-204ENST00000572778 HMX1Q9NP08 348 aaPredicted RBP24.25■■□□□ 1.47
CHMP6-204ENST00000572778 SLC5A4Q9NY91 659 aa24.25■■□□□ 1.47
CHMP6-204ENST00000572778 FLRT1Q9NZU1 646 aa24.25■■□□□ 1.47
CHMP6-204ENST00000572778 PLXNB2O15031 1838 aa24.25■■□□□ 1.47
CHMP6-204ENST00000572778 PARP14Q460N5 1801 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 PRKAR2AP13861 404 aaKnown RBP24.24■■□□□ 1.47
CHMP6-204ENST00000572778 OAZ1P54368 228 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 ZNF543Q08ER8 600 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 IFIT1BQ5T764 474 aaKnown RBP24.24■■□□□ 1.47
CHMP6-204ENST00000572778 MFSD14CQ5VZR4 134 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 CCDC174Q6PII3 467 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 DEFB118Q96PH6 123 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.24■■□□□ 1.47
CHMP6-204ENST00000572778 RPTORQ8N122 1335 aa24.24■■□□□ 1.47
CHMP6-204ENST00000572778 SLC27A2O14975 620 aa24.23■■□□□ 1.47
CHMP6-204ENST00000572778 SNHG28P0DPA3 235 aa24.23■■□□□ 1.47
CHMP6-204ENST00000572778 CACNB2Q08289 660 aaPredicted RBP24.23■■□□□ 1.47
CHMP6-204ENST00000572778 SYDE2Q5VT97 1194 aa24.23■■□□□ 1.47
CHMP6-204ENST00000572778 BTNL9Q6UXG8 535 aa24.23■■□□□ 1.47
CHMP6-204ENST00000572778 U2AF1L4Q8WU68 220 aaKnown RBP24.23■■□□□ 1.47
CHMP6-204ENST00000572778 IFIT3O14879 490 aaKnown RBP24.22■■□□□ 1.47
CHMP6-204ENST00000572778 PGK2P07205 417 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 GOLGA8HP0CJ92 632 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 GJA8P48165 433 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 CREB3L3Q68CJ9 461 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 CHST3Q7LGC8 479 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 AGBL1Q96MI9 1066 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 PAK6Q9NQU5 681 aaPredicted RBP24.22■■□□□ 1.47
CHMP6-204ENST00000572778 HOMER2Q9NSB8 354 aa24.22■■□□□ 1.47
CHMP6-204ENST00000572778 ZNF536O15090 1300 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 ERICH2A1L162 156 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 SGPL1O95470 568 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 CYP2C19P33261 490 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 NECTIN1Q15223 517 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 SEC23AQ15436 765 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 GPATCH4Q5T3I0 446 aaKnown RBP24.21■■□□□ 1.47
CHMP6-204ENST00000572778 MAP3K21Q5TCX8 1036 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 CHST13Q8NET6 341 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 DDX11Q96FC9 970 aa24.21■■□□□ 1.47
CHMP6-204ENST00000572778 FBXO40Q9UH90 709 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms