RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 RNPC3Q96LT9 517 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 TMEM39AQ9NV64 488 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 LAMA2P24043 3122 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 DNAJC25-GNG10A0A024R161 153 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 MOXD2PA6NHM9 499 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 GSG1L2A8MUP6 293 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 DCDC2CA8MYV0 355 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 ATP2A1O14983 1001 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 ZBED4O75132 1171 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 SNAI1O95863 264 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 NDUFB10O96000 172 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 FPGSQ05932 587 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 FAAP100Q0VG06 881 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 MYLIPQ8WY64 445 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 STARD7Q9NQZ5 370 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 RIPK3Q9Y572 518 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 SYNRGQ9UMZ2 1314 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 LTBP2Q14767 1821 aa11.81□□□□□ -0.52
TRAPPC1-205ENST00000572656 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 DUSP11O75319 330 aaKnown RBP11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 KCNA10Q16322 511 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 CCSAPQ6IQ19 270 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 STK11IPQ8N1F8 1099 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 KBTBD3Q8NAB2 608 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 MKL1Q969V6 931 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 ELP1O95163 1332 aa11.8□□□□□ -0.52
TRAPPC1-205ENST00000572656 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 TIMP1P01033 207 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 FOSL2P15408 326 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 CST5P28325 142 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 SLC4A3P48751 1232 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 ACVR2BQ13705 512 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 ZNF444Q8N0Y2 327 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 CPXCR1Q8N123 301 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 PCSK9Q8NBP7 692 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 APPBP2Q92624 585 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 OSBP2Q969R2 916 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 ABHD16BQ9H3Z7 469 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 ZNF287Q9HBT7 754 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 RAVER2Q9HCJ3 691 aaKnown RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 SYNPO2Q9UMS6 1093 aa11.79□□□□□ -0.52
TRAPPC1-205ENST00000572656 ZFYP08048 801 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 GNAT2P19087 354 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 CDK7P50613 346 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 OAZ1P54368 228 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 MFSD5Q6N075 450 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 CHST13Q8NET6 341 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 GLT1D1Q96MS3 346 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 SPC25Q9HBM1 224 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 TBX21Q9UL17 535 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 MROH7Q68CQ1 1323 aa11.78□□□□□ -0.52
TRAPPC1-205ENST00000572656 MYADML2A6NDP7 307 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 GPAA1O43292 621 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 ADCY6O43306 1168 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 PRDM1O75626 825 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 TTLL1O95922 423 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 APPP05067 770 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 ASGR1P07306 291 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 C6orf222P0C671 652 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 FDX1P10109 184 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 DNAJB2P25686 324 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 TDO2P48775 406 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 GJA9P57773 515 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 PPIGQ13427 754 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 CCDC174Q6PII3 467 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 ARMCX2Q7L311 632 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 FGD4Q96M96 766 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 EPB41L4AQ9HCS5 686 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 RCAN3Q9UKA8 241 aa11.77□□□□□ -0.53
TRAPPC1-205ENST00000572656 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms