RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
RAB40B-204ENST00000571554 RIPK3Q9Y572 518 aa16.33■□□□□ 0.2
RAB40B-204ENST00000571554 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
RAB40B-204ENST00000571554 IGHA2P01877 340 aa16.32■□□□□ 0.2
RAB40B-204ENST00000571554 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-204ENST00000571554 SYN1P17600 705 aa16.32■□□□□ 0.2
RAB40B-204ENST00000571554 HAND2P61296 217 aa16.32■□□□□ 0.2
RAB40B-204ENST00000571554 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
RAB40B-204ENST00000571554 OLFML2BQ68BL8 750 aa16.32■□□□□ 0.2
RAB40B-204ENST00000571554 MKL1Q969V6 931 aa16.32■□□□□ 0.2
RAB40B-204ENST00000571554 RAVER2Q9HCJ3 691 aaKnown RBP16.32■□□□□ 0.2
RAB40B-204ENST00000571554 STX8Q9UNK0 236 aa16.32■□□□□ 0.2
RAB40B-204ENST00000571554 CTDP1Q9Y5B0 961 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-204ENST00000571554 FGAP02671 866 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 HSPD1P10809 573 aaKnown RBP16.31■□□□□ 0.2
RAB40B-204ENST00000571554 BMP3P12645 472 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
RAB40B-204ENST00000571554 KCTD2Q14681 263 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
RAB40B-204ENST00000571554 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 IL17RBQ9NRM6 502 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 SLC5A4Q9NY91 659 aa16.31■□□□□ 0.2
RAB40B-204ENST00000571554 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 ZBED4O75132 1171 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 COL6A1P12109 1028 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 SDSP20132 328 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 MCCP23508 829 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 IKQ13123 557 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-204ENST00000571554 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 GJC2Q5T442 439 aaPredicted RBP16.3■□□□□ 0.2
RAB40B-204ENST00000571554 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
RAB40B-204ENST00000571554 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
RAB40B-204ENST00000571554 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
RAB40B-204ENST00000571554 SNAP25P60880 206 aa16.29■□□□□ 0.2
RAB40B-204ENST00000571554 ALX1Q15699 326 aa16.29■□□□□ 0.2
RAB40B-204ENST00000571554 KCTD1Q719H9 257 aa16.29■□□□□ 0.2
RAB40B-204ENST00000571554 SENP6Q9GZR1 1112 aaPredicted RBP16.29■□□□□ 0.2
RAB40B-204ENST00000571554 SLC38A10Q9HBR0 1119 aa16.29■□□□□ 0.2
RAB40B-204ENST00000571554 HOMER2Q9NSB8 354 aa16.29■□□□□ 0.2
RAB40B-204ENST00000571554 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
RAB40B-204ENST00000571554 MSCO60682 206 aa16.28■□□□□ 0.2
RAB40B-204ENST00000571554 SLC1A4P43007 532 aa16.28■□□□□ 0.2
RAB40B-204ENST00000571554 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
RAB40B-204ENST00000571554 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
RAB40B-204ENST00000571554 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
RAB40B-204ENST00000571554 SMCHD1A6NHR9 2005 aa16.28■□□□□ 0.2
RAB40B-204ENST00000571554 DNAH12Q6ZR08 3092 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 SEPT4O43236 478 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 ORC4O43929 436 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 COPB2P35606 906 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 STAT2P52630 851 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 CCDC96Q2M329 555 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 DDX11Q96FC9 970 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 TINF2Q9BSI4 451 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 PRO3102Q9H379 93 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 OSBPL3Q9H4L5 887 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
RAB40B-204ENST00000571554 DNM1LO00429 736 aa16.26■□□□□ 0.19
RAB40B-204ENST00000571554 PDE4AP27815 886 aa16.26■□□□□ 0.19
RAB40B-204ENST00000571554 CCDC174Q6PII3 467 aa16.26■□□□□ 0.19
RAB40B-204ENST00000571554 GMCL1Q96IK5 515 aa16.26■□□□□ 0.19
RAB40B-204ENST00000571554 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
RAB40B-204ENST00000571554 MCM3APO60318 1980 aa16.26■□□□□ 0.19
RAB40B-204ENST00000571554 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
RAB40B-204ENST00000571554 FGRP09769 529 aa16.25■□□□□ 0.19
RAB40B-204ENST00000571554 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
RAB40B-204ENST00000571554 STAG1Q8WVM7 1258 aa16.25■□□□□ 0.19
RAB40B-204ENST00000571554 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 ZNF536O15090 1300 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 ZMYM6O95789 1325 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 NEDD4P46934 1319 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 FRMPD2Q68DX3 1309 aaPredicted RBP16.24■□□□□ 0.19
RAB40B-204ENST00000571554 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 SLC16A2P36021 539 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
RAB40B-204ENST00000571554 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 TTBK2Q6IQ55 1244 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 FAM160B2Q86V87 743 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 ARRDC4Q8NCT1 418 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
RAB40B-204ENST00000571554 PRR12Q9ULL5 1215 aa16.24■□□□□ 0.19
RAB40B-204ENST00000571554 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
RAB40B-204ENST00000571554 DNAJC25-GNG10A0A024R161 153 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 PGK1P00558 417 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 ZNF865P0CJ78 1059 aaPredicted RBP16.23■□□□□ 0.19
RAB40B-204ENST00000571554 ALAS1P13196 640 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 ADCYAP1R1P41586 468 aa16.23■□□□□ 0.19
RAB40B-204ENST00000571554 MFAP1P55081 439 aaKnown RBP16.23■□□□□ 0.19
RAB40B-204ENST00000571554 LRRC41Q15345 812 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms