RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 IFIT3O14879 490 aaKnown RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 SLC34A2O95436 690 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 ERCC3P19447 782 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 FLT3LGP49771 235 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 FCGRTP55899 365 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 EXOSC10Q01780 885 aaKnown RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 TRIM32Q13049 653 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 TRDNQ13061 729 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 PKN2Q16513 984 aaKnown RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 CCDC96Q2M329 555 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 MORN1Q5T089 497 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 IFIT1BQ5T764 474 aaKnown RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 FBXO46Q6PJ61 603 aaPredicted RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 BTNL9Q6UXG8 535 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 RALYLQ86SE5 291 aaKnown RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 NBPF11Q86T75 865 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 DCAF4Q8WV16 495 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 USP6NLQ92738 828 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 NEK1Q96PY6 1258 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 UBAC1Q9BSL1 405 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 UBA5Q9GZZ9 404 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 SLC38A10Q9HBR0 1119 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 HOXC10Q9NYD6 342 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 FEM1BQ9UK73 627 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
SMG6-209ENST00000571442 BRCA2P51587 3418 aa8.2□□□□□ -1.1
SMG6-209ENST00000571442 PLA2G6O60733 806 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 COBLO75128 1261 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 REC8O95072 547 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 ELNP15502 786 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 RXRAP19793 462 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 STAT2P52630 851 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 TROAPQ12815 778 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 PLS1Q14651 629 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 KIF22Q14807 665 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 WTAPQ15007 396 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 CCL14Q16627 93 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 TMEM67Q5HYA8 995 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 PPP4R3BQ5MIZ7 849 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 RIOX2Q8IUF8 465 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 CPXCR1Q8N123 301 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 PRPF38AQ8NAV1 312 aaKnown RBP8.19□□□□□ -1.1
SMG6-209ENST00000571442 NPLOC4Q8TAT6 608 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 SH3TC2Q8TF17 1288 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 GTF3C2Q8WUA4 911 aaPredicted RBP8.19□□□□□ -1.1
SMG6-209ENST00000571442 AGBL1Q96MI9 1066 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 JAKMIP1Q96N16 626 aaKnown RBP8.19□□□□□ -1.1
SMG6-209ENST00000571442 RANBP17Q9H2T7 1088 aaKnown RBP8.19□□□□□ -1.1
SMG6-209ENST00000571442 KAT14Q9H8E8 782 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 FLRT1Q9NZU1 646 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 MAD2L2Q9UI95 211 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 BRPF3Q9ULD4 1205 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 PLXNA1Q9UIW2 1896 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 MYH6P13533 1939 aa8.19□□□□□ -1.1
SMG6-209ENST00000571442 PALM3A6NDB9 673 aaPredicted RBP8.18□□□□□ -1.1
SMG6-209ENST00000571442 ATP2A1O14983 1001 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 CYTH3O43739 400 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 CYP2B6P20813 491 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 PTPREP23469 700 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 MCM5P33992 734 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 STAT3P40763 770 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 NT5C2P49902 561 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 GRB14Q14449 540 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 GRM4Q14833 912 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 CCDC178Q5BJE1 867 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 MUM1L1Q5H9M0 696 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 SYDE2Q5VT97 1194 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 WDR78Q5VTH9 848 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 SNRNP48Q6IEG0 339 aaKnown RBP8.18□□□□□ -1.1
SMG6-209ENST00000571442 DHX32Q7L7V1 743 aaKnown RBP8.18□□□□□ -1.1
SMG6-209ENST00000571442 PLEKHH3Q7Z736 793 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 FAM160B2Q86V87 743 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 ZNF654Q8IZM8 581 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 MB21D1Q8N884 522 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 SHCBP1Q8NEM2 672 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 TRIB2Q92519 343 aa8.18□□□□□ -1.1
SMG6-209ENST00000571442 MCM3APO60318 1980 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 PPP1R11O60927 126 aaPredicted RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 ZBED4O75132 1171 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 PLEKHA8P1O95397 391 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 IGHA2P01877 340 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 PGK2P07205 417 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 PARP1P09874 1014 aaKnown RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 RPS6KB1P23443 525 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 MAPK4P31152 587 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 IKQ13123 557 aaPredicted RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 IRF5Q13568 498 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 MTFR1Q15390 333 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 CCDC144CPQ8IYA2 1237 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 ADGRF4Q8IZF3 695 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 CMTR1Q8N1G2 835 aaKnown RBP8.17□□□□□ -1.1
SMG6-209ENST00000571442 CHURC1Q8WUH1 139 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 NUP133Q8WUM0 1156 aa8.17□□□□□ -1.1
SMG6-209ENST00000571442 COA7Q96BR5 231 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms