RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PKN1Q16512 942 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 SYDE2Q5VT97 1194 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 VAT1LQ9HCJ6 419 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 HOXC10Q9NYD6 342 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
CDRT1-206ENST00000571263 PASKQ96RG2 1323 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 A0A0G2JLL6 359 aaPredicted RBP13.75□□□□□ -0.21
CDRT1-206ENST00000571263 VPS37CA5D8V6 355 aaPredicted RBP13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L15C9J2P7 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L13C9JLJ4 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L11C9JVI0 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L18D6R9N7 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L22D6RA61 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L17D6RBQ6 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L19D6RCP7 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L20D6RJB6 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
CDRT1-206ENST00000571263 GNA11P29992 359 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 USP17L24Q0WX57 530 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 SNAPC2Q13487 334 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
CDRT1-206ENST00000571263 TTBK2Q6IQ55 1244 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 PRRT2Q7Z6L0 340 aaPredicted RBP13.75□□□□□ -0.21
CDRT1-206ENST00000571263 SPICE1Q8N0Z3 855 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 SLF1Q9BQI6 1058 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 AMNQ9BXJ7 453 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
CDRT1-206ENST00000571263 ESYT2A0FGR8 921 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 F13A1P00488 732 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 VCAM1P19320 739 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 YY1P25490 414 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 HOXA7P31268 230 aaPredicted RBP13.74□□□□□ -0.21
CDRT1-206ENST00000571263 GTF2A2P52657 109 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 HMGCS2P54868 508 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
CDRT1-206ENST00000571263 COG2Q14746 738 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 KRT40Q6A162 431 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 ATL3Q6DD88 541 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 CCDC84Q86UT8 332 aaPredicted RBP13.74□□□□□ -0.21
CDRT1-206ENST00000571263 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 OTUD5Q96G74 571 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 PIGSQ96S52 555 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 MAF1Q9H063 256 aa13.74□□□□□ -0.21
CDRT1-206ENST00000571263 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
CDRT1-206ENST00000571263 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
CDRT1-206ENST00000571263 IRF6O14896 467 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 ZBED4O75132 1171 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 MMP1P03956 469 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 CETPP11597 493 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 SLC16A2P36021 539 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 NLRP5P59047 1200 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 CDC37Q16543 378 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-206ENST00000571263 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 CST9Q5W186 159 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 MOB2Q70IA6 237 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 HOMER1Q86YM7 354 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 HHIPL1Q96JK4 782 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-206ENST00000571263 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
CDRT1-206ENST00000571263 FOXP1Q9H334 677 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-206ENST00000571263 RPAP3Q9H6T3 665 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-206ENST00000571263 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
CDRT1-206ENST00000571263 FLOT1O75955 427 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 OSBPP22059 807 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 KRT2P35908 639 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
CDRT1-206ENST00000571263 OAZ1P54368 228 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 HUNKP57058 714 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 FBXO11Q86XK2 927 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 SAMD3Q8N6K7 520 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
CDRT1-206ENST00000571263 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 WNK4Q96J92 1243 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 PPP1R9AQ9ULJ8 1098 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 SLC45A1Q9Y2W3 748 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
CDRT1-206ENST00000571263 PHIPQ8WWQ0 1821 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 OTOFQ9HC10 1997 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 STXBP3O00186 592 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 PPFIA3O75145 1194 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDRT1-206ENST00000571263 DSG3P32926 999 aa13.71□□□□□ -0.21
CDRT1-206ENST00000571263 NAPAP54920 295 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms