RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CDH23Q9H251 3354 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 CDK5RAP2Q96SN8 1893 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-205ENST00000571028 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-205ENST00000571028 SPDYE16A6NNV3 312 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-205ENST00000571028 SGSM2O43147 1006 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 PQBP1O60828 265 aaKnown RBP15.77■□□□□ 0.12
CCDC40-205ENST00000571028 PLA2G5P39877 138 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 HAND2P61296 217 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 CTDSPL2Q05D32 466 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 LRRC41Q15345 812 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 C1orf53Q5VUE5 145 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 ATXN2LQ8WWM7 1075 aaKnown RBP15.77■□□□□ 0.12
CCDC40-205ENST00000571028 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 RAPGEFL1Q9UHV5 662 aa15.77■□□□□ 0.12
CCDC40-205ENST00000571028 NAV1Q8NEY1 1877 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 RAD50Q92878 1312 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 FGAP02671 866 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 RARBP10826 455 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 PTH1RQ03431 593 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 PPARAQ07869 468 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 ABCB5Q2M3G0 1257 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-205ENST00000571028 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 FAM47AQ5JRC9 791 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 RNF180Q86T96 592 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 TANGO6Q9C0B7 1094 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 XPNPEP3Q9NQH7 507 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 TMEM39AQ9NV64 488 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 THEGQ9P2T0 379 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 MYH1P12882 1939 aa15.76■□□□□ 0.11
CCDC40-205ENST00000571028 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
CCDC40-205ENST00000571028 PRDM1O75626 825 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 CDK8P49336 464 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 PLS1Q14651 629 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 MOV10L1Q9BXT6 1211 aaKnown RBP15.75■□□□□ 0.11
CCDC40-205ENST00000571028 SPATC1LQ9H0A9 340 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 EHD4Q9H223 541 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 MKNK2Q9HBH9 465 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 ANO2Q9NQ90 1003 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 TOMM22Q9NS69 142 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 HOXC10Q9NYD6 342 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 FOCADQ5VW36 1801 aa15.75■□□□□ 0.11
CCDC40-205ENST00000571028 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
CCDC40-205ENST00000571028 SIPA1L1O43166 1804 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
CCDC40-205ENST00000571028 ERCC3P19447 782 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 SHMT1P34896 483 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 EPHB4P54760 987 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 GABPAQ06546 454 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 COG2Q14746 738 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 ALX1Q15699 326 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 PRAMEF19Q5SWL8 479 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 CCDC174Q6PII3 467 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 SHCBP1Q8NEM2 672 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 ACER1Q8TDN7 264 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 UHRF1Q96T88 793 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-205ENST00000571028 DSCC1Q9BVC3 393 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 INCENPQ9NQS7 918 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 PHF24Q9UPV7 400 aa15.74■□□□□ 0.11
CCDC40-205ENST00000571028 DCDC2CA8MYV0 355 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 KIAA0355O15063 1070 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 ITGB8P26012 769 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 MRPS5P82675 430 aaKnown RBP15.73■□□□□ 0.11
CCDC40-205ENST00000571028 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
CCDC40-205ENST00000571028 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 C16orf86Q6ZW13 317 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 ASB2Q96Q27 587 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 MROH8Q9H579 483 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 SWAP70Q9UH65 585 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 MUC3AQ02505 3323 aa15.73■□□□□ 0.11
CCDC40-205ENST00000571028 ZNF213O14771 459 aa15.72■□□□□ 0.11
CCDC40-205ENST00000571028 COBLO75128 1261 aa15.72■□□□□ 0.11
CCDC40-205ENST00000571028 IGHA2P01877 340 aa15.72■□□□□ 0.11
CCDC40-205ENST00000571028 MB21D1Q8N884 522 aa15.72■□□□□ 0.11
CCDC40-205ENST00000571028 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
CCDC40-205ENST00000571028 RLFQ13129 1914 aa15.72■□□□□ 0.11
CCDC40-205ENST00000571028 A0A1W2PQ45 241 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-205ENST00000571028 A0A1W2PQY0 241 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 PGK1P00558 417 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 FCER1AP12319 257 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 AKR1B1P15121 316 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 PDE4BQ07343 736 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.11
CCDC40-205ENST00000571028 AKNAD1Q5T1N1 836 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-205ENST00000571028 ZNF444Q8N0Y2 327 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-205ENST00000571028 ABRAQ8N0Z2 381 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 MAML3Q96JK9 1138 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-205ENST00000571028 NRBP1Q9UHY1 535 aa15.71■□□□□ 0.11
CCDC40-205ENST00000571028 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
CCDC40-205ENST00000571028 IGFBP4P22692 258 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 SEPT2Q15019 361 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms