RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NR0B2Q15466 257 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 FYB2Q5VWT5 728 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 TDRD10Q5VZ19 366 aaKnown RBP6.48□□□□□ -1.37
NUP88-202ENST00000570937 DCAF15Q66K64 600 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 FAM169BQ8N8A8 192 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 SLC43A3Q8NBI5 491 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
NUP88-202ENST00000570937 KIRREL1Q96J84 757 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 G6PC3Q9BUM1 346 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 FOXP3Q9BZS1 431 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 SP110Q9HB58 689 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 TCFL5Q9UL49 500 aa6.48□□□□□ -1.37
NUP88-202ENST00000570937 CUX2O14529 1486 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 TMEM82A0PJX8 343 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 GLI1P08151 1106 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 RAC2P15153 192 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 CD247P20963 164 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 CTSKP43235 329 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 HK2P52789 917 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 DUSP4Q13115 394 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 GP6Q9HCN6 339 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 EBF1Q9UH73 591 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 MINPP1Q9UNW1 487 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 CFTRP13569 1480 aa6.47□□□□□ -1.37
NUP88-202ENST00000570937 A0A087WZG4 1122 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 FITM1A5D6W6 292 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 GSNP06396 782 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 SYPP08247 313 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 FGRP09769 529 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 ENDOUP21128 410 aaKnown RBP6.46□□□□□ -1.38
NUP88-202ENST00000570937 ERVFC1P60507 584 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 CHRNEQ04844 493 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 KCNMB1Q16558 191 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 SPPL2CQ8IUH8 684 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 LILRA2Q8N149 483 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 OXR1Q8N573 874 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 ANKS4BQ8N8V4 417 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 KLHL6Q8WZ60 621 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 GMLQ99445 158 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 FHOD1Q9Y613 1164 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 CCDC88BA6NC98 1476 aa6.46□□□□□ -1.38
NUP88-202ENST00000570937 ZNF503-AS2A6NEH8 195 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.45□□□□□ -1.38
NUP88-202ENST00000570937 CBFA2T2O43439 604 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 ZNF205O95201 554 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 TP53P04637 393 aaPredicted RBP6.45□□□□□ -1.38
NUP88-202ENST00000570937 ZNF445P59923 1031 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 SLC7A5Q01650 507 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 PPP2R5EQ16537 467 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 GNPTABQ3T906 1256 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 ABHD4Q8TB40 342 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 ANAPC16Q96DE5 110 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 HAUS7Q99871 368 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 FAM53CQ9NYF3 392 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 ZNF451Q9Y4E5 1061 aa6.45□□□□□ -1.38
NUP88-202ENST00000570937 SSU72P8A0A1W2PR75 194 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 SSBP05455 408 aaKnown RBP eCLIP6.44□□□□□ -1.38
NUP88-202ENST00000570937 ITGA4P13612 1032 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 VAV1P15498 845 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 RPL10P27635 214 aaKnown RBP6.44□□□□□ -1.38
NUP88-202ENST00000570937 KIR2DL1P43626 348 aaPredicted RBP6.44□□□□□ -1.38
NUP88-202ENST00000570937 KIR2DL2P43627 348 aaPredicted RBP6.44□□□□□ -1.38
NUP88-202ENST00000570937 ARID5AQ03989 594 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 TCEAL1Q15170 157 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 TMEM67Q5HYA8 995 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 WAPLQ7Z5K2 1190 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 MAP6Q96JE9 813 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.44□□□□□ -1.38
NUP88-202ENST00000570937 DSCC1Q9BVC3 393 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 KLHL25Q9H0H3 589 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 WHRNQ9P202 907 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 FANCD2Q9BXW9 1451 aa6.44□□□□□ -1.38
NUP88-202ENST00000570937 CEP164Q9UPV0 1460 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 MEIS1O00470 390 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 TNNI3KQ59H18 835 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 NOL9Q5SY16 702 aaKnown RBP6.43□□□□□ -1.38
NUP88-202ENST00000570937 OGFOD2Q6N063 350 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 CRTC3Q6UUV7 619 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 MCF2L2Q86YR7 1114 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 POU5F2Q8N7G0 328 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 FCRL2Q96LA5 508 aaPredicted RBP6.43□□□□□ -1.38
NUP88-202ENST00000570937 PRKAG3Q9UGI9 489 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 PCDHB10Q9UN67 800 aa6.43□□□□□ -1.38
NUP88-202ENST00000570937 NOTOA8MTQ0 251 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 FKTNO75072 461 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 SNX17Q15036 470 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 HEATR6Q6AI08 1181 aaKnown RBP6.42□□□□□ -1.38
NUP88-202ENST00000570937 VHLLQ6RSH7 139 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 FIBCD1Q8N539 461 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 BRF1Q92994 677 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 SLC12A9Q9BXP2 914 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 FAM86C1Q9NVL1 165 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.42□□□□□ -1.38
NUP88-202ENST00000570937 TNFRSF10DQ9UBN6 386 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 ZMYM5Q9UJ78 669 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 DIS3Q9Y2L1 958 aaKnown RBP6.42□□□□□ -1.38
NUP88-202ENST00000570937 SF3B6Q9Y3B4 125 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms