RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SLF1Q9BQI6 1058 aa22.78■■□□□ 1.24
SCARF1-204ENST00000570902 FAM184BQ9ULE4 1060 aa22.78■■□□□ 1.24
SCARF1-204ENST00000570902 ACLYP53396 1101 aa22.77■■□□□ 1.24
SCARF1-204ENST00000570902 EPHB4P54760 987 aa22.77■■□□□ 1.24
SCARF1-204ENST00000570902 SIRT2Q8IXJ6 389 aa22.77■■□□□ 1.24
SCARF1-204ENST00000570902 DDX11Q96FC9 970 aa22.77■■□□□ 1.24
SCARF1-204ENST00000570902 CHMP4BQ9H444 224 aaKnown RBP22.77■■□□□ 1.24
SCARF1-204ENST00000570902 ZBTB40Q9NUA8 1239 aa22.77■■□□□ 1.24
SCARF1-204ENST00000570902 SYNRGQ9UMZ2 1314 aa22.77■■□□□ 1.24
SCARF1-204ENST00000570902 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.76■■□□□ 1.23
SCARF1-204ENST00000570902 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.76■■□□□ 1.23
SCARF1-204ENST00000570902 FAAP100Q0VG06 881 aa22.76■■□□□ 1.23
SCARF1-204ENST00000570902 SNRNP48Q6IEG0 339 aaKnown RBP22.76■■□□□ 1.23
SCARF1-204ENST00000570902 MAMDC4Q6UXC1 1216 aa22.76■■□□□ 1.23
SCARF1-204ENST00000570902 LENG1Q96BZ8 264 aaPredicted RBP22.76■■□□□ 1.23
SCARF1-204ENST00000570902 MROH7Q68CQ1 1323 aa22.76■■□□□ 1.23
SCARF1-204ENST00000570902 SPTBN5Q9NRC6 3674 aaKnown RBP22.76■■□□□ 1.23
SCARF1-204ENST00000570902 ZNF467Q7Z7K2 595 aaPredicted RBP22.75■■□□□ 1.23
SCARF1-204ENST00000570902 PRPF38AQ8NAV1 312 aaKnown RBP22.75■■□□□ 1.23
SCARF1-204ENST00000570902 KLHDC9Q8NEP7 349 aa22.75■■□□□ 1.23
SCARF1-204ENST00000570902 SYMPKQ92797 1274 aaKnown RBP22.75■■□□□ 1.23
SCARF1-204ENST00000570902 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.75■■□□□ 1.23
SCARF1-204ENST00000570902 PUS7LQ9H0K6 701 aaKnown RBP22.75■■□□□ 1.23
SCARF1-204ENST00000570902 NYAP2Q9P242 653 aa22.75■■□□□ 1.23
SCARF1-204ENST00000570902 MYH7P12883 1935 aa22.74■■□□□ 1.23
SCARF1-204ENST00000570902 DUSP11O75319 330 aaKnown RBP22.74■■□□□ 1.23
SCARF1-204ENST00000570902 CHGBP05060 677 aa22.74■■□□□ 1.23
SCARF1-204ENST00000570902 SBK1Q52WX2 424 aa22.74■■□□□ 1.23
SCARF1-204ENST00000570902 CCDC174Q6PII3 467 aa22.74■■□□□ 1.23
SCARF1-204ENST00000570902 GLT1D1Q96MS3 346 aa22.74■■□□□ 1.23
SCARF1-204ENST00000570902 MKNK2Q9HBH9 465 aa22.74■■□□□ 1.23
SCARF1-204ENST00000570902 ZHX1Q9UKY1 873 aaPredicted RBP22.74■■□□□ 1.23
SCARF1-204ENST00000570902 CTDP1Q9Y5B0 961 aaPredicted RBP22.74■■□□□ 1.23
SCARF1-204ENST00000570902 DNAJC25-GNG10A0A024R161 153 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 F5H6K3 240 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 ATP2A1O14983 1001 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 SNAI1O95863 264 aaPredicted RBP22.73■■□□□ 1.23
SCARF1-204ENST00000570902 TIMP1P01033 207 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 DNAJB2P25686 324 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 KLRC3Q07444 240 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 KCNA10Q16322 511 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 GIMAP6Q6P9H5 292 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 PCSK9Q8NBP7 692 aaKnown RBP22.73■■□□□ 1.23
SCARF1-204ENST00000570902 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
SCARF1-204ENST00000570902 SPC25Q9HBM1 224 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 ELP1O95163 1332 aa22.73■■□□□ 1.23
SCARF1-204ENST00000570902 GREB1LQ9C091 1923 aaPredicted RBP22.72■■□□□ 1.23
SCARF1-204ENST00000570902 PRUNE2Q8WUY3 3088 aa22.72■■□□□ 1.23
SCARF1-204ENST00000570902 ZBED4O75132 1171 aa22.72■■□□□ 1.23
SCARF1-204ENST00000570902 NDUFB10O96000 172 aa22.72■■□□□ 1.23
SCARF1-204ENST00000570902 RASA1P20936 1047 aa22.72■■□□□ 1.23
SCARF1-204ENST00000570902 CST5P28325 142 aaPredicted RBP22.72■■□□□ 1.23
SCARF1-204ENST00000570902 CCSAPQ6IQ19 270 aaPredicted RBP22.72■■□□□ 1.23
SCARF1-204ENST00000570902 COG6Q9Y2V7 657 aa22.72■■□□□ 1.23
SCARF1-204ENST00000570902 RIPK3Q9Y572 518 aa22.72■■□□□ 1.23
SCARF1-204ENST00000570902 ACVR2BQ13705 512 aa22.71■■□□□ 1.23
SCARF1-204ENST00000570902 GRIN2CQ14957 1233 aa22.71■■□□□ 1.23
SCARF1-204ENST00000570902 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.71■■□□□ 1.23
SCARF1-204ENST00000570902 STRBPQ96SI9 672 aaKnown RBP22.71■■□□□ 1.23
SCARF1-204ENST00000570902 LRRCC1Q9C099 1032 aa22.71■■□□□ 1.23
SCARF1-204ENST00000570902 ZNF287Q9HBT7 754 aa22.71■■□□□ 1.23
SCARF1-204ENST00000570902 FBXO40Q9UH90 709 aa22.71■■□□□ 1.23
SCARF1-204ENST00000570902 TBX21Q9UL17 535 aa22.71■■□□□ 1.23
SCARF1-204ENST00000570902 C6orf222P0C671 652 aaPredicted RBP22.7■■□□□ 1.22
SCARF1-204ENST00000570902 SLC4A3P48751 1232 aa22.7■■□□□ 1.22
SCARF1-204ENST00000570902 PPIGQ13427 754 aaKnown RBP eCLIP22.7■■□□□ 1.22
SCARF1-204ENST00000570902 MFSD5Q6N075 450 aa22.7■■□□□ 1.22
SCARF1-204ENST00000570902 CPXCR1Q8N123 301 aa22.7■■□□□ 1.22
SCARF1-204ENST00000570902 ANKRD35Q8N283 1001 aa22.7■■□□□ 1.22
SCARF1-204ENST00000570902 ABHD16BQ9H3Z7 469 aa22.7■■□□□ 1.22
SCARF1-204ENST00000570902 ZNF576Q9H609 170 aa22.7■■□□□ 1.22
SCARF1-204ENST00000570902 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.7■■□□□ 1.22
SCARF1-204ENST00000570902 MINDY4BA8MYZ0 360 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 VTI1AQ96AJ9 217 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 TIFAQ96CG3 184 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 SLC38A10Q9HBR0 1119 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 PRDM6Q9NQX0 595 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 CLIP2Q9UDT6 1046 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 SYNPO2Q9UMS6 1093 aa22.69■■□□□ 1.22
SCARF1-204ENST00000570902 MYADML2A6NDP7 307 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 GSG1L2A8MUP6 293 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 ASGR1P07306 291 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 CDK7P50613 346 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 OAZ1P54368 228 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 STK11IPQ8N1F8 1099 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 CHST13Q8NET6 341 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 KIFC2Q96AC6 838 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.68■■□□□ 1.22
SCARF1-204ENST00000570902 UPF3AQ9H1J1 476 aaKnown RBP22.68■■□□□ 1.22
SCARF1-204ENST00000570902 FEM1BQ9UK73 627 aa22.68■■□□□ 1.22
SCARF1-204ENST00000570902 A0A0U1RQG5 324 aaPredicted RBP22.67■■□□□ 1.22
SCARF1-204ENST00000570902 GJA9P57773 515 aa22.67■■□□□ 1.22
SCARF1-204ENST00000570902 CCDC144BQ3MJ40 725 aa22.67■■□□□ 1.22
SCARF1-204ENST00000570902 ZNF444Q8N0Y2 327 aaPredicted RBP22.67■■□□□ 1.22
SCARF1-204ENST00000570902 TMEM199Q8N511 208 aa22.67■■□□□ 1.22
SCARF1-204ENST00000570902 MKL1Q969V6 931 aa22.67■■□□□ 1.22
SCARF1-204ENST00000570902 RAVER2Q9HCJ3 691 aaKnown RBP22.67■■□□□ 1.22
SCARF1-204ENST00000570902 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
SCARF1-204ENST00000570902 IGKV6D-41A0A0C4DH26 115 aa22.66■■□□□ 1.22
SCARF1-204ENST00000570902 ARVCFO00192 962 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms