RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PDLIM7Q9NR12 457 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 NYAP2Q9P242 653 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 CTDP1Q9Y5B0 961 aaPredicted RBP10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
CTDNEP1-203ENST00000570385 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.76
CTDNEP1-203ENST00000570385 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 PATL2C9JE40 543 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 ZBED4O75132 1171 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 SNAI1O95863 264 aaPredicted RBP10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 ITGB8P26012 769 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 GIMAP6Q6P9H5 292 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 RNF180Q86T96 592 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 GUCD1Q96NT3 240 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 FSD1Q9BTV5 496 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 INCENPQ9NQS7 918 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 ZHX1Q9UKY1 873 aaPredicted RBP10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 PHF24Q9UPV7 400 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 CNPY2Q9Y2B0 182 aa10.27□□□□□ -0.77
CTDNEP1-203ENST00000570385 IGKV6D-41A0A0C4DH26 115 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 ZFYP08048 801 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 AKR1A1P14550 325 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 GNAT2P19087 354 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 COPB2P35606 906 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 SNX17Q15036 470 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 CCDC129Q6ZRS4 1044 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 MTMR4Q9NYA4 1195 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 NRBP1Q9UHY1 535 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 GREB1LQ9C091 1923 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 MYH4Q9Y623 1939 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 MCM3APO60318 1980 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 ROBO3Q96MS0 1386 aa10.26□□□□□ -0.77
CTDNEP1-203ENST00000570385 MYO9BQ13459 2157 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 DNAJC25-GNG10A0A024R161 153 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 A0A1W2PQ45 241 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 A0A1W2PQY0 241 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 ADAMTS4O75173 837 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 TTLL1O95922 423 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 CLTBP09497 229 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 EPHB4P54760 987 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 SNAP25P60880 206 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 TFAP4Q01664 338 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 ZNF697Q5TEC3 545 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 SLFN13Q68D06 897 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 RASGRP2Q7LDG7 609 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 ANKRD35Q8N283 1001 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 PI4K2BQ8TCG2 481 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 NACAP1Q9BZK3 213 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 NAPBQ9H115 298 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 SLC38A10Q9HBR0 1119 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 ZNF287Q9HBT7 754 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 TMEM39AQ9NV64 488 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 FEM1BQ9UK73 627 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 FAM184BQ9ULE4 1060 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 DDX49Q9Y6V7 483 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 SYNRGQ9UMZ2 1314 aa10.25□□□□□ -0.77
CTDNEP1-203ENST00000570385 TMEM232C9JQI7 657 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 ERC2O15083 957 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 ADCY6O43306 1168 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 NMT2O60551 498 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 BMP3P12645 472 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 RAG1P15918 1043 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 PTGS1P23219 599 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 MCCP23508 829 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 ACLYP53396 1101 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 CNTN2Q02246 1040 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 PPARAQ07869 468 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 IKQ13123 557 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 ACVR2BQ13705 512 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 KCNA10Q16322 511 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 ZMYM1Q5SVZ6 1142 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 NEDD1Q8NHV4 660 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 MKL1Q969V6 931 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 FGD4Q96M96 766 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 STARD7Q9NQZ5 370 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 TACC3Q9Y6A5 838 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 A0A0C4DFX4 3053 aa10.24□□□□□ -0.77
CTDNEP1-203ENST00000570385 ATP2A1O14983 1001 aa10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 SLC3A2P08195 630 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 C6orf222P0C671 652 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 MX1P20591 662 aa10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 PDE4BQ07343 736 aa10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 FAAP100Q0VG06 881 aa10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 CCDC144BQ3MJ40 725 aa10.23□□□□□ -0.77
CTDNEP1-203ENST00000570385 ANKRD45Q5TZF3 282 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms