RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 SMARCA5O60264 1052 aaPredicted RBP25.16■■□□□ 1.62
PKD1-240ENST00000570253 PQBP1O60828 265 aaKnown RBP25.16■■□□□ 1.62
PKD1-240ENST00000570253 CHGBP05060 677 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 APPP05067 770 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 KLRC3Q07444 240 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 C9orf50Q5SZB4 431 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 KBTBD3Q8NAB2 608 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 REPS2Q8NFH8 660 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 APPBP2Q92624 585 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 SPC25Q9HBM1 224 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 STARD7Q9NQZ5 370 aa25.16■■□□□ 1.62
PKD1-240ENST00000570253 ZHX1Q9UKY1 873 aaPredicted RBP25.16■■□□□ 1.62
PKD1-240ENST00000570253 TRIM43BA6NCK2 446 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 DCDC2CA8MYV0 355 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 ZNF865P0CJ78 1059 aaPredicted RBP25.15■■□□□ 1.62
PKD1-240ENST00000570253 RASA1P20936 1047 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 SH3RF1Q7Z6J0 888 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 TRIM43Q96BQ3 446 aaPredicted RBP25.15■■□□□ 1.62
PKD1-240ENST00000570253 RNPC3Q96LT9 517 aaKnown RBP25.15■■□□□ 1.62
PKD1-240ENST00000570253 NUP88Q99567 741 aaPredicted RBP25.15■■□□□ 1.62
PKD1-240ENST00000570253 TMEM39AQ9NV64 488 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 CLIP2Q9UDT6 1046 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 FBXO40Q9UH90 709 aa25.15■■□□□ 1.62
PKD1-240ENST00000570253 MOXD2PA6NHM9 499 aa25.14■■□□□ 1.62
PKD1-240ENST00000570253 CPXCR1Q8N123 301 aa25.14■■□□□ 1.62
PKD1-240ENST00000570253 GREB1LQ9C091 1923 aaPredicted RBP25.14■■□□□ 1.61
PKD1-240ENST00000570253 GSG1L2A8MUP6 293 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 RNF113AO15541 343 aaKnown RBP25.13■■□□□ 1.61
PKD1-240ENST00000570253 NDUFB10O96000 172 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 SLC3A2P08195 630 aaKnown RBP25.13■■□□□ 1.61
PKD1-240ENST00000570253 TAL1P17542 331 aaPredicted RBP25.13■■□□□ 1.61
PKD1-240ENST00000570253 FPGSQ05932 587 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 ANKRD35Q8N283 1001 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 KIFC2Q96AC6 838 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 NACAP1Q9BZK3 213 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 FEM1BQ9UK73 627 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 ISY1Q9ULR0 285 aaKnown RBP25.13■■□□□ 1.61
PKD1-240ENST00000570253 SYNPO2Q9UMS6 1093 aa25.13■■□□□ 1.61
PKD1-240ENST00000570253 MROH7Q68CQ1 1323 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 MYH4Q9Y623 1939 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 ATP2A1O14983 1001 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 KIAA0355O15063 1070 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 GPAA1O43292 621 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 ZNF467Q7Z7K2 595 aaPredicted RBP25.12■■□□□ 1.61
PKD1-240ENST00000570253 TOX2Q96NM4 488 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 CDX2Q99626 313 aaPredicted RBP25.12■■□□□ 1.61
PKD1-240ENST00000570253 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.12■■□□□ 1.61
PKD1-240ENST00000570253 SEMA6BQ9H3T3 888 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 SYNRGQ9UMZ2 1314 aa25.12■■□□□ 1.61
PKD1-240ENST00000570253 TMEM265A0A087WTH1 108 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 ADAMTS4O75173 837 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 FDX1P10109 184 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 ACLYP53396 1101 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 PDE4BQ07343 736 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 CCDC174Q6PII3 467 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 MAMDC4Q6UXC1 1216 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 PCSK9Q8NBP7 692 aaKnown RBP25.11■■□□□ 1.61
PKD1-240ENST00000570253 GLT1D1Q96MS3 346 aa25.11■■□□□ 1.61
PKD1-240ENST00000570253 DUSP11O75319 330 aaKnown RBP25.1■■□□□ 1.61
PKD1-240ENST00000570253 TTLL1O95922 423 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 TSPY3P0CV98 308 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 TSPY8P0CW00 308 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 OAZ1P54368 228 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 PPP4R3BQ5MIZ7 849 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 CHST13Q8NET6 341 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 MAFAQ8NHW3 353 aaPredicted RBP25.1■■□□□ 1.61
PKD1-240ENST00000570253 OSBP2Q969R2 916 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 VTI1AQ96AJ9 217 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 LENG1Q96BZ8 264 aaPredicted RBP25.1■■□□□ 1.61
PKD1-240ENST00000570253 ABHD16BQ9H3Z7 469 aa25.1■■□□□ 1.61
PKD1-240ENST00000570253 LAMA2P24043 3122 aaKnown RBP25.09■■□□□ 1.61
PKD1-240ENST00000570253 ANKRD33Q7Z3H0 272 aa25.09■■□□□ 1.61
PKD1-240ENST00000570253 RAVER2Q9HCJ3 691 aaKnown RBP25.09■■□□□ 1.61
PKD1-240ENST00000570253 PATL2C9JE40 543 aaKnown RBP25.08■■□□□ 1.61
PKD1-240ENST00000570253 ERC2O15083 957 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 C6orf222P0C671 652 aaPredicted RBP25.08■■□□□ 1.61
PKD1-240ENST00000570253 IKQ13123 557 aaPredicted RBP25.08■■□□□ 1.61
PKD1-240ENST00000570253 ACVR2BQ13705 512 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 KCNA10Q16322 511 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 GMCL1P1Q8NEA9 526 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 MKL1Q969V6 931 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 SLC38A10Q9HBR0 1119 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.08■■□□□ 1.61
PKD1-240ENST00000570253 MTMR4Q9NYA4 1195 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 RIPK3Q9Y572 518 aa25.08■■□□□ 1.61
PKD1-240ENST00000570253 DNAJC25-GNG10A0A024R161 153 aa25.07■■□□□ 1.6
PKD1-240ENST00000570253 PRDM1O75626 825 aa25.07■■□□□ 1.6
PKD1-240ENST00000570253 SNAI1O95863 264 aaPredicted RBP25.07■■□□□ 1.6
PKD1-240ENST00000570253 FOSL2P15408 326 aa25.07■■□□□ 1.6
PKD1-240ENST00000570253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.07■■□□□ 1.6
PKD1-240ENST00000570253 CEP95Q96GE4 821 aa25.07■■□□□ 1.6
PKD1-240ENST00000570253 COL25A1Q9BXS0 654 aaPredicted RBP25.07■■□□□ 1.6
PKD1-240ENST00000570253 DCTPP1Q9H773 170 aa25.07■■□□□ 1.6
PKD1-240ENST00000570253 ELP1O95163 1332 aa25.07■■□□□ 1.6
PKD1-240ENST00000570253 IGKV6D-41A0A0C4DH26 115 aa25.06■■□□□ 1.6
PKD1-240ENST00000570253 TLR3O15455 904 aaKnown RBP25.06■■□□□ 1.6
PKD1-240ENST00000570253 BMP3P12645 472 aa25.06■■□□□ 1.6
PKD1-240ENST00000570253 CST5P28325 142 aaPredicted RBP25.06■■□□□ 1.6
PKD1-240ENST00000570253 FAAP100Q0VG06 881 aa25.06■■□□□ 1.6
PKD1-240ENST00000570253 IFNL3Q8IZI9 196 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms