RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	MYADML2	A6NDP7	307 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	SNAI1	O95863	264 aa	Predicted RBP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	COPB2	P35606	906 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	IRX5	P78411	483 aa	Predicted RBP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	KCNA10	Q16322	511 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	SNRNP48	Q6IEG0	339 aa	Known RBP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	ANKRD33	Q7Z3H0	272 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	STK11IP	Q8N1F8	1099 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	DDX11	Q96FC9	970 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	DDRGK1	Q96HY6	314 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	TSEN34	Q9BSV6	310 aa	Known RBP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	PRDM6	Q9NQX0	595 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	FAM184B	Q9ULE4	1060 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	RIPK3	Q9Y572	518 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	PLXNA1	Q9UIW2	1896 aa		13.23	□□□□□ -0.29
CMC2-223	ENST00000570195	CTR9	Q6PD62	1173 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	KLHDC9	Q8NEP7	349 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	NUP133	Q8WUM0	1156 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	SYMPK	Q92797	1274 aa	Known RBP	13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	TOX2	Q96NM4	488 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	SLF1	Q9BQI6	1058 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	TEX13B	Q9BXU2	312 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	ZNF576	Q9H609	170 aa		13.22	□□□□□ -0.29
CMC2-223	ENST00000570195	ZBED9	Q6R2W3	1325 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	MOXD2P	A6NHM9	499 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	GRXCR1	A8MXD5	290 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	TIMP1	P01033	207 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	ATP5J	P18859	108 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	UBE3C	Q15386	1083 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	SIRT2	Q8IXJ6	389 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	CPXCR1	Q8N123	301 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	PPM1E	Q8WY54	764 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	TIFA	Q96CG3	184 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	HAUS7	Q99871	368 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	PUS7L	Q9H0K6	701 aa	Known RBP	13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	TBX21	Q9UL17	535 aa		13.21	□□□□□ -0.29
CMC2-223	ENST00000570195	SYNGAP1	Q96PV0	1343 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	RAB11FIP3	O75154	756 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	DUSP11	O75319	330 aa	Known RBP	13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	HMMR	O75330	724 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	C6orf222	P0C671	652 aa	Predicted RBP	13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	PBX2	P40425	430 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	TJAP1	Q5JTD0	557 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	MFSD5	Q6N075	450 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	CCDC129	Q6ZRS4	1044 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	C16orf59	Q7L2K0	433 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	MSL3	Q8N5Y2	521 aa	Known RBP	13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	VTI1A	Q96AJ9	217 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	GLT1D1	Q96MS3	346 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	PPP1R12C	Q9BZL4	782 aa		13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.2	□□□□□ -0.3
CMC2-223	ENST00000570195	DNAJC25-GNG10	A0A024R161	153 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195		F5H6K3	240 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	ADCY6	O43306	1168 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	NDUFB10	O96000	172 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	ASGR1	P07306	291 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	CSF2RA	P15509	400 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	RASA1	P20936	1047 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	KLRC3	Q07444	240 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	PPIG	Q13427	754 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	9e-6	■■□□□ 12.8
CMC2-223	ENST00000570195	ACVR2B	Q13705	512 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	TMEM240	Q5SV17	173 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	MAMDC4	Q6UXC1	1216 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	KIFC2	Q96AC6	838 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	PBX4	Q9BYU1	374 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	MKNK2	Q9HBH9	465 aa		13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	RAVER2	Q9HCJ3	691 aa	Known RBP	13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.19	□□□□□ -0.3
CMC2-223	ENST00000570195	ELP1	O95163	1332 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	MROH7	Q68CQ1	1323 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	MINDY4B	A8MYZ0	360 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	ZBED4	O75132	1171 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	ACR	P10323	421 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	CST5	P28325	142 aa	Predicted RBP	13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	CDK7	P50613	346 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	CCDC144B	Q3MJ40	725 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	ZSCAN25	Q6NSZ9	544 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	ANKRD35	Q8N283	1001 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	PRPF38A	Q8NAV1	312 aa	Known RBP	13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	PCSK9	Q8NBP7	692 aa	Known RBP	13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	FGD4	Q96M96	766 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	GAS2L1	Q99501	681 aa	Predicted RBP	13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	PRDM12	Q9H4Q4	367 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	SPC25	Q9HBM1	224 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	NYAP2	Q9P242	653 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	CLIP2	Q9UDT6	1046 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195	COG6	Q9Y2V7	657 aa		13.18	□□□□□ -0.3
CMC2-223	ENST00000570195		A0A0U1RQG5	324 aa	Predicted RBP	13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	ARVCF	O00192	962 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	TNFRSF10A	O00220	468 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	GJA9	P57773	515 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	GNAS	Q5JWF2	1037 aa		13.17	□□□□□ -0.3

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