RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RRAGDQ9NQL2 400 aaPredicted RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 PITPNM2Q9BZ72 1349 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 LINC00854A0A1B0GVQ3 168 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 SURF6O75683 361 aaKnown RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 CD2BP2O95400 341 aaKnown RBP7.53□□□□□ -1.2
SMG1-217ENST00000569764 IL33O95760 270 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 ITGA6P23229 1130 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 MTMR14Q8NCE2 650 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 GGA3Q9NZ52 723 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 KIF3AQ9Y496 699 aa7.53□□□□□ -1.2
SMG1-217ENST00000569764 TMEM127O75204 238 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 HSD3B2P26439 372 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 NT5C2P49902 561 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 PRKG1Q13976 671 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 GCKRQ14397 625 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 CFAP58Q5T655 872 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 VPS53Q5VIR6 699 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 MYSM1Q5VVJ2 828 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 ZNF746Q6NUN9 644 aaPredicted RBP7.52□□□□□ -1.2
SMG1-217ENST00000569764 KIAA0825Q8IV33 1275 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 FAM81BQ96LP2 452 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 UIMC1Q96RL1 719 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 DNAJC25Q9H1X3 360 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 RNF41Q9H4P4 317 aaPredicted RBP7.52□□□□□ -1.2
SMG1-217ENST00000569764 DBNDD1Q9H9R9 158 aa7.52□□□□□ -1.2
SMG1-217ENST00000569764 SALL3Q9BXA9 1300 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 KIF28PB7ZC32 967 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 MSCO60682 206 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 ZBED4O75132 1171 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 MYL1P05976 194 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 CHMP4BP1P59074 171 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 PDE4BQ07343 736 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 COBLL1Q53SF7 1204 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 GJC2Q5T442 439 aaPredicted RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 ARRDC4Q8NCT1 418 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 TAGLN3Q9UI15 199 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 TRIM17Q9Y577 477 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 SNX5Q9Y5X3 404 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 CNGA1P29973 690 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 AP1ARQ63HQ0 302 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 TBC1D9Q6ZT07 1266 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 SAPCD2Q86UD0 394 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 JPH3Q8WXH2 748 aaPredicted RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 E2F7Q96AV8 911 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 SH3KBP1Q96B97 665 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 DDX11Q96FC9 970 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 CTNNA3Q9UI47 895 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 MRC1P22897 1456 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 DCDC2CA8MYV0 355 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 TRPA1O75762 1119 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 ERO1BQ86YB8 467 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 ANKRD13BQ86YJ7 626 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 C17orf50Q8WW18 174 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 GOLGA1Q92805 767 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 PAWRQ96IZ0 340 aaKnown RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 L3MBTL3Q96JM7 780 aaPredicted RBP7.52□□□□□ -1.21
SMG1-217ENST00000569764 IL25Q9H293 177 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 RNF19AQ9NV58 838 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 ODF2LQ9ULJ1 636 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 CNPY2Q9Y2B0 182 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 UBR2Q8IWV8 1755 aa7.52□□□□□ -1.21
SMG1-217ENST00000569764 KBTBD13C9JR72 458 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 TFRCP02786 760 aaKnown RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 IGKV5-2P06315 115 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 ZFYP08048 801 aaPredicted RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 FDX1P10109 184 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 HPDP32754 393 aaPredicted RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 PRPF4BQ13523 1007 aaKnown RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 INO80DQ53TQ3 878 aaPredicted RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 IFFO2Q5TF58 517 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 CCDC24Q8N4L8 307 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 GOLGA6L1Q8N7Z2 621 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 N4BP2L2Q92802 583 aaPredicted RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 SLC7A5P2Q9GIP4 190 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 PCNTO95613 3336 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 SCAMP3O14828 347 aaKnown RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 NDUFV2P19404 249 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 MAPK1P28482 360 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 PDXDC1Q6P996 788 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 CTR9Q6PD62 1173 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 JAMLQ86YT9 394 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 TEX11Q8IYF3 940 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 NEK9Q8TD19 979 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 KANSL2Q9H9L4 492 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 SP3Q02447 781 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 BMP2KLQ5H9B9 411 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 SHQ1Q6PI26 577 aaKnown RBP7.51□□□□□ -1.21
SMG1-217ENST00000569764 CATIPQ7Z7H3 387 aa7.51□□□□□ -1.21
SMG1-217ENST00000569764 RALYLQ86SE5 291 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms