RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PTPN18Q99952 460 aa27.25■■□□□ 1.95
RAB40C-212ENST00000569575 ASCC2Q9H1I8 757 aaPredicted RBP27.25■■□□□ 1.95
RAB40C-212ENST00000569575 GPCPD1Q9NPB8 672 aa27.25■■□□□ 1.95
RAB40C-212ENST00000569575 THSD7BQ9C0I4 1608 aa27.24■■□□□ 1.95
RAB40C-212ENST00000569575 IFNAR1P17181 557 aa27.24■■□□□ 1.95
RAB40C-212ENST00000569575 SYDE2Q5VT97 1194 aa27.24■■□□□ 1.95
RAB40C-212ENST00000569575 TMX3Q96JJ7 454 aa27.24■■□□□ 1.95
RAB40C-212ENST00000569575 NUP88Q99567 741 aaPredicted RBP27.24■■□□□ 1.95
RAB40C-212ENST00000569575 FAM217BQ9NTX9 383 aaPredicted RBP27.24■■□□□ 1.95
RAB40C-212ENST00000569575 ISY1Q9ULR0 285 aaKnown RBP27.24■■□□□ 1.95
RAB40C-212ENST00000569575 FRMPD2Q68DX3 1309 aaPredicted RBP27.23■■□□□ 1.95
RAB40C-212ENST00000569575 K7ELQ4 463 aaPredicted RBP27.23■■□□□ 1.95
RAB40C-212ENST00000569575 OAZ1P54368 228 aa27.23■■□□□ 1.95
RAB40C-212ENST00000569575 GRM1Q13255 1194 aa27.23■■□□□ 1.95
RAB40C-212ENST00000569575 BECN1Q14457 450 aa27.23■■□□□ 1.95
RAB40C-212ENST00000569575 FAM43AQ8N2R8 423 aa27.23■■□□□ 1.95
RAB40C-212ENST00000569575 STAG2Q8N3U4 1231 aa27.23■■□□□ 1.95
RAB40C-212ENST00000569575 CFHR5Q9BXR6 569 aa27.23■■□□□ 1.95
RAB40C-212ENST00000569575 ZBED4O75132 1171 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 GOLGA8HP0CJ92 632 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 RXRAP19793 462 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 CDC27P30260 824 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 SCRN1Q12765 414 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 DGKZQ13574 1117 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 RNF26Q9BY78 433 aaPredicted RBP27.22■■□□□ 1.95
RAB40C-212ENST00000569575 PRR12Q9ULL5 1215 aa27.22■■□□□ 1.95
RAB40C-212ENST00000569575 ATP2A1O14983 1001 aa27.21■■□□□ 1.95
RAB40C-212ENST00000569575 ADD1P35611 737 aaKnown RBP27.21■■□□□ 1.95
RAB40C-212ENST00000569575 CCT2P78371 535 aaKnown RBP27.21■■□□□ 1.95
RAB40C-212ENST00000569575 NTRK3Q16288 839 aa27.21■■□□□ 1.95
RAB40C-212ENST00000569575 CCDC144CPQ8IYA2 1237 aa27.21■■□□□ 1.95
RAB40C-212ENST00000569575 TRIM22Q8IYM9 498 aa27.21■■□□□ 1.95
RAB40C-212ENST00000569575 MTMR8Q96EF0 704 aa27.21■■□□□ 1.95
RAB40C-212ENST00000569575 LARP6Q9BRS8 491 aaKnown RBP27.21■■□□□ 1.95
RAB40C-212ENST00000569575 ZFYVE28Q9HCC9 887 aa27.21■■□□□ 1.95
RAB40C-212ENST00000569575 PARP14Q460N5 1801 aa27.2■■□□□ 1.95
RAB40C-212ENST00000569575 IGF2BP3O00425 579 aaKnown RBP eCLIP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 AOC2O75106 756 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 CD2BP2O95400 341 aaKnown RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 HERVK_113P62684 666 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 MAP2K1Q02750 393 aaPredicted RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 STK3Q13188 491 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 TTBK2Q6IQ55 1244 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 NOL8Q76FK4 1167 aaKnown RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 ADGRF4Q8IZF3 695 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 FAM177A1Q8N128 213 aaPredicted RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 SMCR8Q8TEV9 937 aaPredicted RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 RRP36Q96EU6 259 aaKnown RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 P2RX7Q99572 595 aaKnown RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 MAF1Q9H063 256 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 RANBP17Q9H2T7 1088 aaKnown RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 RABGAP1Q9Y3P9 1069 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 CTDP1Q9Y5B0 961 aaPredicted RBP27.2■■□□□ 1.94
RAB40C-212ENST00000569575 RLFQ13129 1914 aa27.2■■□□□ 1.94
RAB40C-212ENST00000569575 SPDYE16A6NNV3 312 aaPredicted RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 hCG_1984214I3L0E3 225 aa27.19■■□□□ 1.94
RAB40C-212ENST00000569575 VWA5AO00534 786 aa27.19■■□□□ 1.94
RAB40C-212ENST00000569575 PRPF3O43395 683 aaKnown RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 CA12O43570 354 aa27.19■■□□□ 1.94
RAB40C-212ENST00000569575 AKAP17AQ02040 695 aaKnown RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 FUT2Q10981 343 aa27.19■■□□□ 1.94
RAB40C-212ENST00000569575 SRBD1Q8N5C6 995 aaKnown RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 ZNF713Q8N859 430 aaPredicted RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 KIFC2Q96AC6 838 aa27.19■■□□□ 1.94
RAB40C-212ENST00000569575 INTS4Q96HW7 963 aaKnown RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 SLC38A10Q9HBR0 1119 aa27.19■■□□□ 1.94
RAB40C-212ENST00000569575 SEC63Q9UGP8 760 aaKnown RBP27.19■■□□□ 1.94
RAB40C-212ENST00000569575 COPB2P35606 906 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 HMGN5P82970 282 aaKnown RBP27.18■■□□□ 1.94
RAB40C-212ENST00000569575 HTRA3P83110 453 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 CUL4AQ13619 759 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 TAF1CQ15572 869 aaPredicted RBP27.18■■□□□ 1.94
RAB40C-212ENST00000569575 TEX2Q8IWB9 1127 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 UBA5Q9GZZ9 404 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 JMJD4Q9H9V9 463 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 FBXO28Q9NVF7 368 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 SAGE1Q9NXZ1 904 aa27.18■■□□□ 1.94
RAB40C-212ENST00000569575 STK36Q9NRP7 1315 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 PNMA6FA0A0J9YX94 578 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 ZBTB5O15062 677 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 PLEKHA8P1O95397 391 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 SLC16A2P36021 539 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 ANP32AP39687 249 aaKnown RBP27.17■■□□□ 1.94
RAB40C-212ENST00000569575 SSRP1Q08945 709 aaKnown RBP27.17■■□□□ 1.94
RAB40C-212ENST00000569575 RAB11FIP4Q86YS3 637 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 WASF1Q92558 559 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 ZIC5Q96T25 663 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 KIF3AQ9Y496 699 aa27.17■■□□□ 1.94
RAB40C-212ENST00000569575 CYTH3O43739 400 aa27.16■■□□□ 1.94
RAB40C-212ENST00000569575 TLR2O60603 784 aa27.16■■□□□ 1.94
RAB40C-212ENST00000569575 LARGE1O95461 756 aa27.16■■□□□ 1.94
RAB40C-212ENST00000569575 FMNL1O95466 1100 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-212ENST00000569575 RASGRP2Q7LDG7 609 aa27.16■■□□□ 1.94
RAB40C-212ENST00000569575 DNAJC5GQ8N7S2 189 aa27.16■■□□□ 1.94
RAB40C-212ENST00000569575 NCOA5Q9HCD5 579 aaKnown RBP27.16■■□□□ 1.94
RAB40C-212ENST00000569575 TKFCQ3LXA3 575 aa27.15■■□□□ 1.94
RAB40C-212ENST00000569575 NBPF11Q86T75 865 aa27.15■■□□□ 1.94
RAB40C-212ENST00000569575 NECAB1Q8N987 351 aa27.15■■□□□ 1.94
RAB40C-212ENST00000569575 ATG4CQ96DT6 458 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms