RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 HOXA7P31268 230 aaPredicted RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 GTF2F1P35269 517 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH13-213ENST00000569454 LONP1P36776 959 aaKnown RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 FKBP1AP62942 108 aaKnown RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 NR5A1Q13285 461 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 RCSD1Q6JBY9 416 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 AMIGO3Q86WK7 504 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 LRRC8AQ8IWT6 810 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 BLIDQ8IZY5 108 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 CCDC82Q8N4S0 544 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 SRBD1Q8N5C6 995 aaKnown RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 NEDD1Q8NHV4 660 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 SPATA20Q8TB22 786 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 TBC1D16Q8TBP0 767 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 SH3RF3Q8TEJ3 882 aaPredicted RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 GSDMAQ96QA5 445 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 KCNF1Q9H3M0 494 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 CUEDC2Q9H467 287 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 RMND1Q9NWS8 449 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 BCCIPQ9P287 314 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH13-213ENST00000569454 PCDHA4Q9UN74 947 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 R3HCC1Q9Y3T6 440 aaKnown RBP6.52□□□□□ -1.37
CDH13-213ENST00000569454 PCDHB6Q9Y5E3 794 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 MYH2Q9UKX2 1941 aa6.52□□□□□ -1.37
CDH13-213ENST00000569454 FOCADQ5VW36 1801 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 CCDC194A0A1B0GVG4 234 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 PALM3A6NDB9 673 aaPredicted RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 WTIPA6NIX2 430 aaPredicted RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 C6orf229H3BNL8 230 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 POLR2DO15514 142 aaKnown RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 ACTN4O43707 911 aaKnown RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 USP17L8P0C7I0 530 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 CYP2D6P10635 497 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 RASA1P20936 1047 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 GNA11P29992 359 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 PRPHP41219 470 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 PPP1R2P41236 205 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 NOVP48745 357 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 SARSP49591 514 aaKnown RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 PLCD1P51178 756 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 DDR1Q08345 913 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 MORC3Q14149 939 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 NCAPHQ15003 741 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 DIXDC1Q155Q3 683 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 NPY5RQ15761 445 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 TXNRD1Q16881 649 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 LONRF3Q496Y0 759 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 ASPRV1Q53RT3 343 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 FAM47AQ5JRC9 791 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 FAM182BQ5T319 152 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 PPP1R18Q6NYC8 613 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 KRT25Q7Z3Z0 450 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 FCHSD1Q86WN1 690 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 TEX2Q8IWB9 1127 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 IQUBQ8NA54 791 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 MYRIPQ8NFW9 859 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 ENOX1Q8TC92 643 aaKnown RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 OXER1Q8TDS5 423 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 AK8Q96MA6 479 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 CLIC6Q96NY7 704 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 ZC3H12CQ9C0D7 883 aaKnown RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 CSRNP2Q9H175 543 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 BARHL2Q9NY43 387 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 SEC63Q9UGP8 760 aaKnown RBP6.51□□□□□ -1.37
CDH13-213ENST00000569454 PYCARDQ9ULZ3 195 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 PAXBP1Q9Y5B6 917 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 PCDHA5Q9Y5H7 936 aa6.51□□□□□ -1.37
CDH13-213ENST00000569454 UQCRHLA0A096LP55 91 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 GOLGA6L9A6NEM1 432 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 BIN1O00499 593 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 RRP9O43818 475 aaKnown RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 SERPINC1P01008 464 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 HLA-DOAP06340 250 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 UQCRHP07919 91 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 PARP1P09874 1014 aaKnown RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 SRGNP10124 158 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 SKILP12757 684 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 COL9A1P20849 921 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 CDK8P49336 464 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 RHBDL3P58872 404 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 FANCCQ00597 558 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 MDM2Q00987 491 aaPredicted RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 SPAG1Q07617 926 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 PNOCQ13519 176 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 GRIPAP1Q4V328 841 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 SOGA3Q5TF21 947 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 HHIPL2Q6UWX4 724 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 SMIM5Q71RC9 77 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 PODNQ7Z5L7 613 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 SH3RF1Q7Z6J0 888 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 MAPKAPK5Q8IW41 473 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 CMTR1Q8N1G2 835 aaKnown RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 ZNF710Q8N1W2 664 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 CCDC24Q8N4L8 307 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 RRP36Q96EU6 259 aaKnown RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 MASTLQ96GX5 879 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 CCDC17Q96LX7 622 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms