RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SULF2Q8IWU5 870 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 CRBNQ96SW2 442 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 SMG9Q9H0W8 520 aaKnown RBP10.09□□□□□ -0.79
CCDC113-205ENST00000569374 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
CCDC113-205ENST00000569374 SOX13Q9UN79 622 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 ADCY9O60503 1353 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 COL15A1P39059 1388 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 CEMIPQ8WUJ3 1361 aa10.09□□□□□ -0.79
CCDC113-205ENST00000569374 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-205ENST00000569374 ATP10DQ9P241 1426 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 ADARB2-AS1A8MUL3 147 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 K7ELQ4 463 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-205ENST00000569374 RPS6KA4O75676 772 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 CYP19A1P11511 503 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-205ENST00000569374 ZNF157P51786 506 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-205ENST00000569374 SEZ6Q53EL9 994 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 MCM10Q7L590 875 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 ANAPC16Q96DE5 110 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
CCDC113-205ENST00000569374 CBX8Q9HC52 389 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 MRVI1Q9Y6F6 885 aa10.08□□□□□ -0.8
CCDC113-205ENST00000569374 F13A1P00488 732 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 IMPDH2P12268 514 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 ARNTP27540 789 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 MCM4P33991 863 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 CRKP46108 304 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 MAP2K3P46734 347 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 IKBKEQ14164 716 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 PERM1Q5SV97 790 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 TRAPPC3LQ5T215 181 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 VN1R5Q7Z5H4 357 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 FLAD1Q8NFF5 587 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 JARID2Q92833 1246 aaPredicted RBP10.07□□□□□ -0.8
CCDC113-205ENST00000569374 FERD3LQ96RJ6 166 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 THUMPD2Q9BTF0 503 aaKnown RBP10.07□□□□□ -0.8
CCDC113-205ENST00000569374 PIF1Q9H611 641 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
CCDC113-205ENST00000569374 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 NUP98P52948 1817 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 A0A0G2JLW4 131 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 C2CD2LO14523 706 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 U2AF1L5P0DN76 240 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-205ENST00000569374 BMP6P22004 513 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 ALAS2P22557 587 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 ETFBP38117 255 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 U2AF1Q01081 240 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC113-205ENST00000569374 AP3B2Q13367 1082 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 RAB33AQ14088 237 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 ZNF746Q6NUN9 644 aaPredicted RBP10.06□□□□□ -0.8
CCDC113-205ENST00000569374 REXO1Q8N1G1 1221 aaKnown RBP10.06□□□□□ -0.8
CCDC113-205ENST00000569374 OR6P1Q8NGX9 317 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 TTC9Q92623 222 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
CCDC113-205ENST00000569374 HEG1Q9ULI3 1381 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 GNAT3A8MTJ3 354 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 CLSTN1O94985 981 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 ESRRAP11474 423 aaPredicted RBP10.05□□□□□ -0.8
CCDC113-205ENST00000569374 DPEP1P16444 411 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 CDC27P30260 824 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 CHRNA5P30532 468 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 EIF6P56537 245 aaKnown RBP10.05□□□□□ -0.8
CCDC113-205ENST00000569374 SERINC3Q13530 473 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 ZNF423Q2M1K9 1284 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 BNC2Q6ZN30 1099 aaPredicted RBP10.05□□□□□ -0.8
CCDC113-205ENST00000569374 LACRTQ9GZZ8 138 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 SLX4Q8IY92 1834 aa10.05□□□□□ -0.8
CCDC113-205ENST00000569374 FAM221AA4D161 298 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 POLRMTO00411 1230 aaKnown RBP10.04□□□□□ -0.8
CCDC113-205ENST00000569374 TLR3O15455 904 aaKnown RBP10.04□□□□□ -0.8
CCDC113-205ENST00000569374 CILPO75339 1184 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
CCDC113-205ENST00000569374 KCNA3P22001 575 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 RFC4P35249 363 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 ARL4DP49703 201 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 FAM9BQ8IZU0 186 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 ZNF526Q8TF50 670 aaPredicted RBP10.04□□□□□ -0.8
CCDC113-205ENST00000569374 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 TRIM33Q9UPN9 1127 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 PCDHB5Q9Y5E4 795 aa10.04□□□□□ -0.8
CCDC113-205ENST00000569374 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-205ENST00000569374 ANKRD62A6NC57 917 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 ELOA3DA6NLF2 546 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-205ENST00000569374 RGS9O75916 674 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-205ENST00000569374 NFIXQ14938 502 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 FER1L6Q2WGJ9 1857 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 ELOA3BQ3SY89 546 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 FBXW10Q5XX13 1052 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 FAM117BQ6P1L5 589 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 ZNF790Q6PG37 636 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 REC114Q7Z4M0 266 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 ELOA3Q8NG57 546 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 SRPK1Q96SB4 655 aaKnown RBP10.03□□□□□ -0.8
CCDC113-205ENST00000569374 LPIN3Q9BQK8 851 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 SOX17Q9H6I2 414 aaPredicted RBP10.03□□□□□ -0.8
CCDC113-205ENST00000569374 NAGPAQ9UK23 515 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 PPT2Q9UMR5 302 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 LAMB2P55268 1798 aa10.03□□□□□ -0.8
CCDC113-205ENST00000569374 ANKRD36CQ5JPF3 1778 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms