RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 SMIM24O75264 130 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 STAM2O75886 525 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 RPSAP08865 295 aaKnown RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 FBXO45P0C2W1 286 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 LINGO3P0C6S8 592 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 GHRP10912 638 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 GNAT1P11488 350 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 SKIP12755 728 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 ATICP31939 592 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 CCT5P48643 541 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 OXCT1P55809 520 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 TUBA4AP68366 448 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 KIF5AQ12840 1032 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 ARHGEF6Q15052 776 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 WDR43Q15061 677 aaKnown RBP eCLIP7.23□□□□□ -1.25
KARS-211ENST00000569298 AGERQ15109 404 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 RCN1Q15293 331 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 WHAMMP3Q1A5X7 153 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 CCDC153Q494R4 210 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 LACTB2Q53H82 288 aaPredicted RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 CYB5D1Q6P9G0 228 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 ATF7IPQ6VMQ6 1270 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 NCCRP1Q6ZVX7 275 aaPredicted RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 SH3BP5LQ7L8J4 393 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 TMC6Q7Z403 805 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 USP48Q86UV5 1035 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 LMNTD2Q8IXW0 634 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 CEP57L1Q8IYX8 460 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 FUKQ8N0W3 1084 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 STK11IPQ8N1F8 1099 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 CCDC155Q8N6L0 562 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 NSUN7Q8NE18 718 aaKnown RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 SREK1Q8WXA9 508 aaKnown RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 SNX27Q96L92 541 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 TTC14Q96N46 770 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 ZMAT2Q96NC0 199 aaKnown RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 PRAM1Q96QH2 718 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 UCN2Q96RP3 112 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 BPIFA3Q9BQP9 254 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 C1QTNF2Q9BXJ5 285 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 FAM204AQ9H8W3 233 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 VCX3AQ9NNX9 186 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 HELLSQ9NRZ9 838 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 ZBTB40Q9NUA8 1239 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 RTEL1Q9NZ71 1219 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 G3BP2Q9UN86 482 aaKnown RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 BZW2Q9Y6E2 419 aaKnown RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 CEP170Q5SW79 1584 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 HECW1Q76N89 1606 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 ABCC2Q92887 1545 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 GOLGA6L10A0A0M3HER8 536 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 CFAP69A5D8W1 941 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 MYO1FO00160 1098 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 PRPF3O43395 683 aaKnown RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 MGEA5O60502 916 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 CDC45O75419 566 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 GSTA2P09210 222 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 SNRPBP14678 240 aaKnown RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 ATP4AP20648 1035 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 KRT9P35527 623 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 RAB15P59190 212 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 TUBA1BP68363 451 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 CBX3Q13185 183 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 SPIDRQ14159 915 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 TRIM71Q2Q1W2 868 aaKnown RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 IQCEQ6IPM2 695 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 PRPF40BQ6NWY9 871 aaKnown RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 WDR93Q6P2C0 686 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 TUBA1AQ71U36 451 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 DZIP1Q86YF9 867 aaKnown RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 C1orf131Q8NDD1 294 aaKnown RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 MAIP1Q8WWC4 291 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 PPP1R13BQ96KQ4 1090 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 SH3GL2Q99962 352 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 KLF16Q9BXK1 252 aaPredicted RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 OXCT2Q9BYC2 517 aaPredicted RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 FAM192AQ9GZU8 254 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 DCTPP1Q9H773 170 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 SYNCQ9H7C4 482 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 GALNT8Q9NY28 637 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 C6orf203Q9P0P8 240 aaPredicted RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 MAPK8IP1Q9UQF2 711 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 CARD8Q9Y2G2 431 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.22□□□□□ -1.25
KARS-211ENST00000569298 SH3GLB1Q9Y371 365 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 ARHGAP35Q9NRY4 1499 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 TTC21BQ7Z4L5 1316 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 CDHR2Q9BYE9 1310 aa7.22□□□□□ -1.25
KARS-211ENST00000569298 ABCC11Q96J66 1382 aa7.21□□□□□ -1.25
KARS-211ENST00000569298 PIK3R4Q99570 1358 aa7.21□□□□□ -1.25
KARS-211ENST00000569298 ERCC6L2Q5T890 1561 aa7.21□□□□□ -1.25
KARS-211ENST00000569298 PRG4Q92954 1404 aaPredicted RBP7.21□□□□□ -1.25
KARS-211ENST00000569298 TMEM247A6NEH6 219 aa7.21□□□□□ -1.26
KARS-211ENST00000569298 LSM1O15116 133 aaKnown RBP7.21□□□□□ -1.26
KARS-211ENST00000569298 NAT2P11245 290 aa7.21□□□□□ -1.26
KARS-211ENST00000569298 CPA3P15088 417 aa7.21□□□□□ -1.26
KARS-211ENST00000569298 S100A1P23297 94 aa7.21□□□□□ -1.26
KARS-211ENST00000569298 BDNFP23560 247 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms