RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	FBXO33	Q7Z6M2	555 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	GATAD2B	Q8WXI9	593 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	DDX1	Q92499	740 aa	Known RBP	6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	SPATA25	Q9BR10	227 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	KRTAP3-1	Q9BYR8	98 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	RNF19A	Q9NV58	838 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	KLHL14	Q9P2G3	628 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243		A0A1B0GTL3	188 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	BPNT1	O95861	308 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	PDIA4	P13667	645 aa	Known RBP	6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	ZNF20	P17024	532 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	RPL10	P27635	214 aa	Known RBP	6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	CNR2	P34972	360 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	LIMS1	P48059	325 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	CAMK2G	Q13555	558 aa	Predicted RBP	6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	LSR	Q86X29	649 aa	Predicted RBP	6.3	□□□□□ -1.4
UBR1-209	ENST00000569243		Q8N1X5	172 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	JARID2	Q92833	1246 aa	Predicted RBP	6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	ZMYM5	Q9UJ78	669 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	TLR6	Q9Y2C9	796 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	ZNF281	Q9Y2X9	895 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	DUSP10	Q9Y6W6	482 aa		6.3	□□□□□ -1.4
UBR1-209	ENST00000569243	CYR61	O00622	381 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	SORBS3	O60504	671 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	PLCG1	P19174	1290 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	ERVFRD-1	P60508	538 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	RNF141	Q8WVD5	230 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	RHOV	Q96L33	236 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	C8orf49	Q96NF6	230 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	TMEM74	Q96NL1	305 aa		6.29	□□□□□ -1.4
UBR1-209	ENST00000569243	SHISA3	A0PJX4	238 aa		6.28	□□□□□ -1.4
UBR1-209	ENST00000569243	MPO	P05164	745 aa		6.28	□□□□□ -1.4
UBR1-209	ENST00000569243	RELL1	Q8IUW5	271 aa		6.28	□□□□□ -1.4
UBR1-209	ENST00000569243	NLGN1	Q8N2Q7	840 aa		6.28	□□□□□ -1.4
UBR1-209	ENST00000569243	PLCD4	Q9BRC7	762 aa		6.28	□□□□□ -1.4
UBR1-209	ENST00000569243	ROBO2	Q9HCK4	1378 aa		6.28	□□□□□ -1.4
UBR1-209	ENST00000569243	TGM1	P22735	817 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	ACVRL1	P37023	503 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	CAP1	Q01518	475 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	RAB3GAP1	Q15042	981 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	WAPL	Q7Z5K2	1190 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	MAP6	Q96JE9	813 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	C1QTNF3	Q9BXJ4	246 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	ASPN	Q9BXN1	380 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	WDR26	Q9H7D7	661 aa		6.27	□□□□□ -1.41
UBR1-209	ENST00000569243	F13A1	P00488	732 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	PF4	P02776	101 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	KIR2DL1	P43626	348 aa	Predicted RBP	6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	KIR2DL2	P43627	348 aa	Predicted RBP	6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	CLEC16A	Q2KHT3	1053 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	VWA3B	Q502W6	1294 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	LIPI	Q6XZB0	460 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	AEBP1	Q8IUX7	1158 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	FAM13C	Q8NE31	585 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	LOXL4	Q96JB6	756 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	SUSD2	Q9UGT4	822 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	CORIN	Q9Y5Q5	1042 aa		6.26	□□□□□ -1.41
UBR1-209	ENST00000569243	RBM47	A0AV96	593 aa	Known RBP	6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	NUDT19	A8MXV4	375 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	MPP2	Q14168	576 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	KIR3DS1	Q14943	382 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	SPRED1	Q7Z699	444 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	ENOX1	Q8TC92	643 aa	Known RBP	6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	HHIPL1	Q96JK4	782 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	CCDC74B	Q96LY2	380 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	MRS2	Q9HD23	443 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	KCNQ5	Q9NR82	932 aa		6.25	□□□□□ -1.41
UBR1-209	ENST00000569243	UPK3BL1	B0FP48	263 aa		6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	UPK3BL2	E5RIL1	263 aa		6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	HTR3B	O95264	441 aa		6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	GBP2	P32456	591 aa	Predicted RBP	6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	MLEC	Q14165	292 aa		6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	LRRC3	Q9BY71	257 aa		6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	REV1	Q9UBZ9	1251 aa		6.24	□□□□□ -1.41
UBR1-209	ENST00000569243	IGFBP6	P24592	240 aa	Predicted RBP	6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	TMEM62	Q0P6H9	643 aa		6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	FAM196A	Q6ZSG2	479 aa		6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	REC114	Q7Z4M0	266 aa		6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	FAM161B	Q96MY7	647 aa		6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	VTI1B	Q9UEU0	232 aa		6.23	□□□□□ -1.41
UBR1-209	ENST00000569243	ATE1	O95260	518 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	ARL4A	P40617	200 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	TNNI2	P48788	182 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	RTP1	P59025	263 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	RNF111	Q6ZNA4	994 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	ERMP1	Q7Z2K6	904 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	FNIP1	Q8TF40	1166 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	KREMEN1	Q96MU8	473 aa		6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.22	□□□□□ -1.41
UBR1-209	ENST00000569243	RGS13	O14921	159 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	NOBOX	O60393	691 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	PLA2G1B	P04054	148 aa	Known RBP	6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	PFKL	P17858	780 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	GART	P22102	1010 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	FBLN1	P23142	703 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	SNAP47	Q5SQN1	464 aa		6.21	□□□□□ -1.42
UBR1-209	ENST00000569243	CRIP3	Q6Q6R5	217 aa		6.21	□□□□□ -1.42

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