RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 OTOP2Q7RTS6 562 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 MAGEB6Q8N7X4 407 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 ARHGAP45Q92619 1136 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 CDCA7LQ96GN5 454 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 CCDC17Q96LX7 622 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 CRNKL1Q9BZJ0 848 aaKnown RBP10.51□□□□□ -0.73
SMG1-216ENST00000569122 KCNH6Q9H252 994 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 ABHD16BQ9H3Z7 469 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
SMG1-216ENST00000569122 FPGT-TNNI3KV9GXZ4 949 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
SMG1-216ENST00000569122 FRMPD3Q5JV73 1810 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 KIF28PB7ZC32 967 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 VWA5AO00534 786 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 CD4P01730 458 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 ACTN1P12814 892 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 CYP2C18P33260 490 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 SPICE1Q8N0Z3 855 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 DBNDD2Q9BQY9 259 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 TEX13BQ9BXU2 312 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 UPF3AQ9H1J1 476 aaKnown RBP10.5□□□□□ -0.73
SMG1-216ENST00000569122 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 PIH1D3Q9NQM4 214 aaKnown RBP10.5□□□□□ -0.73
SMG1-216ENST00000569122 MCM9Q9NXL9 1143 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 MTCH2Q9Y6C9 303 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 XIRP2A4UGR9 3374 aa10.5□□□□□ -0.73
SMG1-216ENST00000569122 MAGEB6P1A0A0J9YX57 407 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 ZBBXA8MT70 800 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 SUPT20HL2P0C7V6 817 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 ALADP13716 330 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 NKX3-2P78367 333 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 TTF1Q15361 905 aaPredicted RBP10.49□□□□□ -0.73
SMG1-216ENST00000569122 AMOTL1Q8IY63 956 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 FAM9BQ8IZU0 186 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 PHOSPHO2Q8TCD6 241 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 LENG1Q96BZ8 264 aaPredicted RBP10.49□□□□□ -0.73
SMG1-216ENST00000569122 PPP1R9AQ9ULJ8 1098 aa10.49□□□□□ -0.73
SMG1-216ENST00000569122 CTDP1Q9Y5B0 961 aaPredicted RBP10.49□□□□□ -0.73
SMG1-216ENST00000569122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.49□□□□□ -0.73
SMG1-216ENST00000569122 IPO8O15397 1037 aaKnown RBP10.48□□□□□ -0.73
SMG1-216ENST00000569122 SNAI1O95863 264 aaPredicted RBP10.48□□□□□ -0.73
SMG1-216ENST00000569122 RABGGTBP53611 331 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 SLFN5Q08AF3 891 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 CSPP1Q1MSJ5 1256 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 CCDC144BQ3MJ40 725 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 SLC43A3Q8NBI5 491 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 SNX27Q96L92 541 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 KANSL2Q9H9L4 492 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.48□□□□□ -0.73
SMG1-216ENST00000569122 LMCD1Q9NZU5 365 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 FBXO40Q9UH90 709 aa10.48□□□□□ -0.73
SMG1-216ENST00000569122 ZNF214Q9UL59 606 aaPredicted RBP10.48□□□□□ -0.73
SMG1-216ENST00000569122 CHD9Q3L8U1 2897 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 DNAJC25-GNG10A0A024R161 153 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 MRE11P49959 708 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 CCL23P55773 120 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 ITGA7Q13683 1181 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 NOL8Q76FK4 1167 aaKnown RBP10.47□□□□□ -0.73
SMG1-216ENST00000569122 ANKRD35Q8N283 1001 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 DDRGK1Q96HY6 314 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 SLC9A7Q96T83 725 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
SMG1-216ENST00000569122 MYADML2A6NDP7 307 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 ATP2A1O14983 1001 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 ZBED4O75132 1171 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 CA3P07451 260 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 RFC2P35250 354 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 TNFAIP2Q03169 654 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 SNRNP48Q6IEG0 339 aaKnown RBP10.46□□□□□ -0.73
SMG1-216ENST00000569122 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
SMG1-216ENST00000569122 SLF1Q9BQI6 1058 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 RIOK1Q9BRS2 568 aaKnown RBP10.46□□□□□ -0.73
SMG1-216ENST00000569122 NOC4LQ9BVI4 516 aaKnown RBP10.46□□□□□ -0.73
SMG1-216ENST00000569122 Q9Y3F1 56 aa10.46□□□□□ -0.73
SMG1-216ENST00000569122 PNMA6EA0A0J9YXQ4 647 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 FAM86C2PA6NEL3 165 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 RAD21O60216 631 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 SURF6O75683 361 aaKnown RBP10.45□□□□□ -0.74
SMG1-216ENST00000569122 MYOGP15173 224 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 PUS10Q3MIT2 529 aaKnown RBP10.45□□□□□ -0.74
SMG1-216ENST00000569122 CXCL17Q6UXB2 119 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMG1-216ENST00000569122 ARMCX2Q7L311 632 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 SIAH1Q8IUQ4 282 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 GJD3Q8N144 294 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 REPS2Q8NFH8 660 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 ARNTL2Q8WYA1 636 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 UIMC1Q96RL1 719 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 DCP1AQ9NPI6 582 aaPredicted RBP10.45□□□□□ -0.74
SMG1-216ENST00000569122 C11orf16Q9NQ32 467 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 ATP8A2Q9NTI2 1148 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 FBXO28Q9NVF7 368 aa10.45□□□□□ -0.74
SMG1-216ENST00000569122 SIPA1L1O43166 1804 aa10.44□□□□□ -0.74
SMG1-216ENST00000569122 ASB14A6NK59 587 aa10.44□□□□□ -0.74
SMG1-216ENST00000569122 FDX1P10109 184 aa10.44□□□□□ -0.74
SMG1-216ENST00000569122 EEF2P13639 858 aaKnown RBP10.44□□□□□ -0.74
SMG1-216ENST00000569122 AKR1B1P15121 316 aa10.44□□□□□ -0.74
SMG1-216ENST00000569122 OAZ1P54368 228 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms