RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PRDM1O75626 825 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 AKR1A1P14550 325 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 PDE4BQ07343 736 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 SNX17Q15036 470 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 TRIM60Q495X7 471 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 C1orf53Q5VUE5 145 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 MKL1Q969V6 931 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 FERMT2Q96AC1 680 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 PRDM5Q9NQX1 630 aaPredicted RBP16.28■□□□□ 0.2
CNOT1-215ENST00000569020 SYNPO2Q9UMS6 1093 aa16.28■□□□□ 0.2
CNOT1-215ENST00000569020 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 TTLL1O95922 423 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 SLC3A2P08195 630 aaKnown RBP16.27■□□□□ 0.2
CNOT1-215ENST00000569020 TSPY3P0CV98 308 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 TSPY8P0CW00 308 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 CPXCR1Q8N123 301 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
CNOT1-215ENST00000569020 KIFC2Q96AC6 838 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 NAPBQ9H115 298 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 MTMR4Q9NYA4 1195 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 FEM1BQ9UK73 627 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
CNOT1-215ENST00000569020 PGK1P00558 417 aa16.26■□□□□ 0.19
CNOT1-215ENST00000569020 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
CNOT1-215ENST00000569020 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
CNOT1-215ENST00000569020 PI4K2BQ8TCG2 481 aa16.26■□□□□ 0.19
CNOT1-215ENST00000569020 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
CNOT1-215ENST00000569020 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
CNOT1-215ENST00000569020 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
CNOT1-215ENST00000569020 RIPK3Q9Y572 518 aa16.26■□□□□ 0.19
CNOT1-215ENST00000569020 MCM3APO60318 1980 aa16.26■□□□□ 0.19
CNOT1-215ENST00000569020 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 TAL1P17542 331 aaPredicted RBP16.25■□□□□ 0.19
CNOT1-215ENST00000569020 PPARAQ07869 468 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 LRRC47Q8N1G4 583 aaKnown RBP16.25■□□□□ 0.19
CNOT1-215ENST00000569020 NEDD1Q8NHV4 660 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
CNOT1-215ENST00000569020 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 STXBP5LQ9Y2K9 1186 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 PLIN4Q96Q06 1357 aa16.25■□□□□ 0.19
CNOT1-215ENST00000569020 BMP3P12645 472 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 MX1P20591 662 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 OAZ1P54368 228 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 ZMYM1Q5SVZ6 1142 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 ANKRD35Q8N283 1001 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 BADQ92934 168 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 SLC38A10Q9HBR0 1119 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 FAM184BQ9ULE4 1060 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
CNOT1-215ENST00000569020 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 LAMA3Q16787 3333 aa16.24■□□□□ 0.19
CNOT1-215ENST00000569020 DNAJC25-GNG10A0A024R161 153 aa16.23■□□□□ 0.19
CNOT1-215ENST00000569020 A0A1W2PQ45 241 aaPredicted RBP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 A0A1W2PQY0 241 aa16.23■□□□□ 0.19
CNOT1-215ENST00000569020 FDX1P10109 184 aa16.23■□□□□ 0.19
CNOT1-215ENST00000569020 STAT2P52630 851 aa16.23■□□□□ 0.19
CNOT1-215ENST00000569020 TFAP4Q01664 338 aa16.23■□□□□ 0.19
CNOT1-215ENST00000569020 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
CNOT1-215ENST00000569020 FAM109BQ6ICB4 259 aaPredicted RBP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 TSEN34Q9BSV6 310 aaKnown RBP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 ZHX1Q9UKY1 873 aaPredicted RBP16.23■□□□□ 0.19
CNOT1-215ENST00000569020 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 ADAMTS4O75173 837 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 SNAI1O95863 264 aaPredicted RBP16.22■□□□□ 0.19
CNOT1-215ENST00000569020 CLTBP09497 229 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 TLE2Q04725 743 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 SHHQ15465 462 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 SH3RF1Q7Z6J0 888 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 NUP133Q8WUM0 1156 aa16.22■□□□□ 0.19
CNOT1-215ENST00000569020 TRIM43Q96BQ3 446 aaPredicted RBP16.22■□□□□ 0.19
CNOT1-215ENST00000569020 LENG1Q96BZ8 264 aaPredicted RBP16.22■□□□□ 0.19
CNOT1-215ENST00000569020 SYNRGQ9UMZ2 1314 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 DNAH12Q6ZR08 3092 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 MOXD2PA6NHM9 499 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 SLC1A4P43007 532 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
CNOT1-215ENST00000569020 ACVR2BQ13705 512 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 ZNF697Q5TEC3 545 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 STARD7Q9NQZ5 370 aa16.21■□□□□ 0.19
CNOT1-215ENST00000569020 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.21■□□□□ 0.19
CNOT1-215ENST00000569020 DLL1O00548 723 aa16.2■□□□□ 0.18
CNOT1-215ENST00000569020 PQBP1O60828 265 aaKnown RBP16.2■□□□□ 0.18
CNOT1-215ENST00000569020 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms