RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 RAB30Q15771 203 aa15.04■□□□□ -0
SNX29-207ENST00000568949 PSRC1Q6PGN9 363 aaPredicted RBP15.04■□□□□ -0
SNX29-207ENST00000568949 PCSK9Q8NBP7 692 aaKnown RBP15.04■□□□□ -0
SNX29-207ENST00000568949 ADAMTS19Q8TE59 1207 aa15.04■□□□□ -0
SNX29-207ENST00000568949 PPM1EQ8WY54 764 aa15.04■□□□□ -0
SNX29-207ENST00000568949 GOPCQ9HD26 462 aa15.04■□□□□ -0
SNX29-207ENST00000568949 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
SNX29-207ENST00000568949 DNAJC25-GNG10A0A024R161 153 aa15.03■□□□□ -0
SNX29-207ENST00000568949 GRXCR1A8MXD5 290 aa15.03■□□□□ -0
SNX29-207ENST00000568949 CSF2RAP15509 400 aa15.03■□□□□ -0
SNX29-207ENST00000568949 HSP90AB4PQ58FF6 505 aa15.03■□□□□ -0
SNX29-207ENST00000568949 C12orf60Q5U649 245 aa15.03■□□□□ -0
SNX29-207ENST00000568949 C16orf86Q6ZW13 317 aa15.03■□□□□ -0
SNX29-207ENST00000568949 ZNF467Q7Z7K2 595 aaPredicted RBP15.03■□□□□ -0
SNX29-207ENST00000568949 DDX11Q96FC9 970 aa15.03■□□□□ -0
SNX29-207ENST00000568949 TEX13BQ9BXU2 312 aa15.03■□□□□ -0
SNX29-207ENST00000568949 UPF3AQ9H1J1 476 aaKnown RBP15.03■□□□□ -0
SNX29-207ENST00000568949 ARMT1Q9H993 441 aa15.03■□□□□ -0
SNX29-207ENST00000568949 SPC25Q9HBM1 224 aa15.03■□□□□ -0
SNX29-207ENST00000568949 MSRAQ9UJ68 235 aa15.03■□□□□ -0
SNX29-207ENST00000568949 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
SNX29-207ENST00000568949 A0A0U1RQG5 324 aaPredicted RBP15.02■□□□□ -0
SNX29-207ENST00000568949 MYADML2A6NDP7 307 aa15.02■□□□□ -0
SNX29-207ENST00000568949 ARVCFO00192 962 aa15.02■□□□□ -0
SNX29-207ENST00000568949 GOLIM4O00461 696 aa15.02■□□□□ -0
SNX29-207ENST00000568949 ASGR1P07306 291 aa15.02■□□□□ -0
SNX29-207ENST00000568949 C6orf222P0C671 652 aaPredicted RBP15.02■□□□□ -0
SNX29-207ENST00000568949 ADGRE1Q14246 886 aa15.02■□□□□ -0
SNX29-207ENST00000568949 FAM83BQ5T0W9 1011 aa15.02■□□□□ -0
SNX29-207ENST00000568949 CEP85Q6P2H3 762 aa15.02■□□□□ -0
SNX29-207ENST00000568949 ZNF365Q70YC5 407 aa15.02■□□□□ -0
SNX29-207ENST00000568949 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
SNX29-207ENST00000568949 HERVK_113Q902F9 699 aa15.02■□□□□ -0
SNX29-207ENST00000568949 UHRF1Q96T88 793 aaPredicted RBP15.02■□□□□ -0
SNX29-207ENST00000568949 MTIF3Q9H2K0 278 aaKnown RBP15.02■□□□□ -0
SNX29-207ENST00000568949 ZHX1Q9UKY1 873 aaPredicted RBP15.02■□□□□ -0
SNX29-207ENST00000568949 TLR3O15455 904 aaKnown RBP15.01□□□□□ -0.01
SNX29-207ENST00000568949 PRKAB2O43741 272 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 PLA2G5P39877 138 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 GJA9P57773 515 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 ACVR2BQ13705 512 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNX29-207ENST00000568949 ITPRIPQ8IWB1 547 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 FAM126BQ8IXS8 530 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
SNX29-207ENST00000568949 IL27Q8NEV9 243 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 VTI1AQ96AJ9 217 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 DDRGK1Q96HY6 314 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 DNAJC2Q99543 621 aaKnown RBP15.01□□□□□ -0.01
SNX29-207ENST00000568949 SLF1Q9BQI6 1058 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 IL1RAPL2Q9NP60 686 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 RAPGEFL1Q9UHV5 662 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 MUC3AQ02505 3323 aa15.01□□□□□ -0.01
SNX29-207ENST00000568949 MCM3APO60318 1980 aa15□□□□□ -0.01
SNX29-207ENST00000568949 USP17L12C9JPN9 530 aa15□□□□□ -0.01
SNX29-207ENST00000568949 USP17L21D6R901 530 aa15□□□□□ -0.01
SNX29-207ENST00000568949 ATP2A1O14983 1001 aa15□□□□□ -0.01
SNX29-207ENST00000568949 MBD4O95243 580 aa15□□□□□ -0.01
SNX29-207ENST00000568949 ACRP10323 421 aa15□□□□□ -0.01
SNX29-207ENST00000568949 ADD2P35612 726 aa15□□□□□ -0.01
SNX29-207ENST00000568949 NKX3-2P78367 333 aa15□□□□□ -0.01
SNX29-207ENST00000568949 GNASQ5JWF2 1037 aa15□□□□□ -0.01
SNX29-207ENST00000568949 SNRNP48Q6IEG0 339 aaKnown RBP15□□□□□ -0.01
SNX29-207ENST00000568949 CLASRPQ8N2M8 674 aaKnown RBP15□□□□□ -0.01
SNX29-207ENST00000568949 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
SNX29-207ENST00000568949 ABHD16BQ9H3Z7 469 aa15□□□□□ -0.01
SNX29-207ENST00000568949 IL23AQ9NPF7 189 aa15□□□□□ -0.01
SNX29-207ENST00000568949 CDKN2AIPQ9NXV6 580 aaPredicted RBP15□□□□□ -0.01
SNX29-207ENST00000568949 BDP1A6H8Y1 2624 aa15□□□□□ -0.01
SNX29-207ENST00000568949 CYP2D7A0A087X1C5 515 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 SMIM22K7EJ46 135 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 RAD21O60216 631 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 CD4P01730 458 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 IGFBP4P22692 258 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 CCDC144BQ3MJ40 725 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 PRPF38AQ8NAV1 312 aaKnown RBP14.99□□□□□ -0.01
SNX29-207ENST00000568949 PPP1R12CQ9BZL4 782 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
SNX29-207ENST00000568949 SLC28A3Q9HAS3 691 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
SNX29-207ENST00000568949 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 GREB1LQ9C091 1923 aaPredicted RBP14.98□□□□□ -0.01
SNX29-207ENST00000568949 APBB1O00213 710 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 ADCY6O43306 1168 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 FGBP02675 491 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 IRX5P78411 483 aaPredicted RBP14.98□□□□□ -0.01
SNX29-207ENST00000568949 CCDC85BQ15834 202 aaPredicted RBP14.98□□□□□ -0.01
SNX29-207ENST00000568949 FAM122AQ96E09 287 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNX29-207ENST00000568949 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■■■□□ 16
SNX29-207ENST00000568949 NKX2-4Q9H2Z4 354 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 PAG1Q9NWQ8 432 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 CXXC1Q9P0U4 656 aaPredicted RBP14.98□□□□□ -0.01
SNX29-207ENST00000568949 FBXO40Q9UH90 709 aa14.98□□□□□ -0.01
SNX29-207ENST00000568949 GBF1Q92538 1859 aa14.97□□□□□ -0.01
SNX29-207ENST00000568949 CTAGE5O15320 804 aa14.97□□□□□ -0.01
SNX29-207ENST00000568949 ZBED4O75132 1171 aa14.97□□□□□ -0.01
SNX29-207ENST00000568949 CABYRO75952 493 aa14.97□□□□□ -0.01
SNX29-207ENST00000568949 IFIT2P09913 472 aaKnown RBP14.97□□□□□ -0.01
SNX29-207ENST00000568949 RLBP1P12271 317 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms