RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 MYO5AQ9Y4I1 1855 aaKnown RBP14.43□□□□□ -0.1
VPS9D1-207ENST00000568691 ELP1O95163 1332 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 BRWD1Q9NSI6 2320 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 SMIM22K7EJ46 135 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 GNAI3P08754 354 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 FCER1AP12319 257 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 CST5P28325 142 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 GABPAQ06546 454 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 PLS1Q14651 629 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 PPP2R2DQ66LE6 453 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 NOL10Q9BSC4 688 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 SLC5A4Q9NY91 659 aa14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 ZNFX1Q9P2E3 1918 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-207ENST00000568691 ARVCFO00192 962 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 FGBP02675 491 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 ASGR1P07306 291 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 SKIV2LQ15477 1246 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 CCDC174Q6PII3 467 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 SPRED2Q7Z698 418 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 CLEC10AQ8IUN9 316 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 MB21D1Q8N884 522 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 WNT8AQ9H1J5 351 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 ADAMTS5Q9UNA0 930 aa14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 DIS3Q9Y2L1 958 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-207ENST00000568691 NHLH1Q02575 133 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 MTX1Q13505 466 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 SMC5Q8IY18 1101 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 MIGA1Q8NAN2 632 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 SLC43A3Q8NBI5 491 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 REPS2Q8NFH8 660 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 MMP19Q99542 508 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 UPF3AQ9H1J1 476 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 CERS4Q9HA82 394 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 MYH1P12882 1939 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 PARP14Q460N5 1801 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 GRIN2DO15399 1336 aa14.4□□□□□ -0.1
VPS9D1-207ENST00000568691 SRGAP3O43295 1099 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 LPXNO60711 386 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 IGHDP01880 384 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 UQCRFS1P1P0C7P4 283 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 ZAP70P43403 619 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 GORABQ5T7V8 394 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 SPICE1Q8N0Z3 855 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 FGD4Q96M96 766 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 COG5Q9UP83 839 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 HDAC5Q9UQL6 1122 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 MROH7Q68CQ1 1323 aa14.39□□□□□ -0.11
VPS9D1-207ENST00000568691 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 PRR33A8MZF0 331 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 APBB1O00213 710 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 DUSP11O75319 330 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 FLOT1O75955 427 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 CA3P07451 260 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 CYP7A1P22680 504 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 CCL23P55773 120 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 RIOX2Q8IUF8 465 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 GLT1D1Q96MS3 346 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 CABP5Q9NP86 173 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 ZNF214Q9UL59 606 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 ASTN1O14525 1302 aa14.38□□□□□ -0.11
VPS9D1-207ENST00000568691 DNAJC25-GNG10A0A024R161 153 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 HMMRO75330 724 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 SLC25A27O95847 323 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 GNAI2P04899 355 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 PTGS1P23219 599 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 GJA9P57773 515 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 TTLL4Q14679 1199 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 MAMDC4Q6UXC1 1216 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 FBXL18Q96ME1 805 aa14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 NOC4LQ9BVI4 516 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-207ENST00000568691 C6orf222P0C671 652 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 NKX3-2P78367 333 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 HLA-CQ95604 372 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 AGBL1Q96MI9 1066 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 KATNBL1Q9H079 304 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 HIPK3Q9H422 1215 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 ZHX1Q9UKY1 873 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 CNPY2Q9Y2B0 182 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 SLC4A7Q9Y6M7 1214 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 USP34Q70CQ2 3546 aa14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 COL11A1P12107 1806 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-207ENST00000568691 PNMA6EA0A0J9YXQ4 647 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 USP5P45974 858 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 BEX3Q00994 111 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 TAP1Q03518 808 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 GRB10Q13322 594 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 KCTD2Q14681 263 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 CEP85Q6P2H3 762 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms