RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	PPP1R9A	Q9ULJ8	1098 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	HPS5	Q9UPZ3	1129 aa		13.97	□□□□□ -0.17
FANCA-231	ENST00000568626	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	RLF	Q13129	1914 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	RXRA	P19793	462 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	SYDE2	Q5VT97	1194 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	LBX2	Q6XYB7	198 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	TMTC3	Q6ZXV5	915 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	NOL8	Q76FK4	1167 aa	Known RBP	13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	MB21D1	Q8N884	522 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	GTF3C6	Q969F1	213 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	SNX21	Q969T3	373 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	PTPN18	Q99952	460 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	SPZ1	Q9BXG8	430 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	GPCPD1	Q9NPB8	672 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	WBP1L	Q9NX94	342 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	HOXC10	Q9NYD6	342 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	PNMA2	Q9UL42	364 aa		13.96	□□□□□ -0.17
FANCA-231	ENST00000568626	KLRF2	D3W0D1	207 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	CPLX1	O14810	134 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	CDKL5	O76039	1030 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	GOLGA8H	P0CJ92	632 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	GCLC	P48506	637 aa	Predicted RBP	13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	CTCF	P49711	727 aa	Predicted RBP	13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	LBX1	P52954	281 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	RAB11FIP4	Q86YS3	637 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	CCDC144CP	Q8IYA2	1237 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	ZIC5	Q96T25	663 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	FBXO28	Q9NVF7	368 aa		13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	RBM27	Q9P2N5	1060 aa	Known RBP	13.95	□□□□□ -0.18
FANCA-231	ENST00000568626	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	DSG3	P32926	999 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	HERVK_113	P62684	666 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	TAF1C	Q15572	869 aa	Predicted RBP	13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	ME3	Q16798	604 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	HSCB	Q8IWL3	235 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	STAG2	Q8N3U4	1231 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	CFHR5	Q9BXR6	569 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	ZFYVE28	Q9HCC9	887 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	PRDM10	Q9NQV6	1147 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	SAGE1	Q9NXZ1	904 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	PRR12	Q9ULL5	1215 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	ADAMTS5	Q9UNA0	930 aa		13.94	□□□□□ -0.18
FANCA-231	ENST00000568626	CA12	O43570	354 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	ZBED4	O75132	1171 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	PLEKHA8P1	O95397	391 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	CD2BP2	O95400	341 aa	Known RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	CDC27	P30260	824 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	OAZ1	P54368	228 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	CCT2	P78371	535 aa	Known RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	MAP2K1	Q02750	393 aa	Predicted RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	SCRN1	Q12765	414 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	TRAF1	Q13077	416 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	STK3	Q13188	491 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	TTBK2	Q6IQ55	1244 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	KIFC2	Q96AC6	838 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	LARP6	Q9BRS8	491 aa	Known RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	RANBP17	Q9H2T7	1088 aa	Known RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	RIOX1	Q9H6W3	641 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	SLC38A10	Q9HBR0	1119 aa		13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.93	□□□□□ -0.18
FANCA-231	ENST00000568626	CNTNAP5	Q8WYK1	1306 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	ADGRA2	Q96PE1	1338 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626		K7ELQ4	463 aa	Predicted RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	VWA5A	O00534	786 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	LARGE1	O95461	756 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	CYP2C8	P10632	490 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	IFNAR1	P17181	557 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	ADD1	P35611	737 aa	Known RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	SLC16A2	P36021	539 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	TRIM22	Q8IYM9	498 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	ADGRF4	Q8IZF3	695 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	ATG4C	Q96DT6	458 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	MTMR8	Q96EF0	704 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	RRP36	Q96EU6	259 aa	Known RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	TMX3	Q96JJ7	454 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	P2RX7	Q99572	595 aa	Known RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	LLPH	Q9BRT6	129 aa	Known RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	BEGAIN	Q9BUH8	593 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	RNF26	Q9BY78	433 aa	Predicted RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	UBA5	Q9GZZ9	404 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	NCOA5	Q9HCD5	579 aa	Known RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	SEC63	Q9UGP8	760 aa	Known RBP	13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	RABGAP1	Q9Y3P9	1069 aa		13.92	□□□□□ -0.18
FANCA-231	ENST00000568626	STK36	Q9NRP7	1315 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	CASP8AP2	Q9UKL3	1982 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	ATP2A1	O14983	1001 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	TLR2	O60603	784 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	HSPA8	P11142	646 aa	Known RBP	13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	COPB2	P35606	906 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	AKAP17A	Q02040	695 aa	Known RBP	13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	FUT2	Q10981	343 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	CRHR2	Q13324	411 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	BECN1	Q14457	450 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	NTRK3	Q16288	839 aa		13.91	□□□□□ -0.18
FANCA-231	ENST00000568626	CDC37	Q16543	378 aa	Predicted RBP	13.91	□□□□□ -0.18

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