RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 C16orf86Q6ZW13 317 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 CLASRPQ8N2M8 674 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 RHPN1Q8TCX5 695 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 PBX4Q9BYU1 374 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 THEGQ9P2T0 379 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 CYP2D7A0A087X1C5 515 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 MYADML2A6NDP7 307 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 USP17L12C9JPN9 530 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 USP17L21D6R901 530 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 SNAI1O95863 264 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 PBX2P40425 430 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 TMEM240Q5SV17 173 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 RASIP1Q5U651 963 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 PSRC1Q6PGN9 363 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 TMEM199Q8N511 208 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 PCSK9Q8NBP7 692 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 SLF1Q9BQI6 1058 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 SPC25Q9HBM1 224 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 XIRP2A4UGR9 3374 aa14.2□□□□□ -0.14
GTF3C1-209ENST00000568569 NCOR1O75376 2440 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 DNAJC25-GNG10A0A024R161 153 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 SMIM22K7EJ46 135 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 IFIT2P09913 472 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 C6orf222P0C671 652 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 CSF2RAP15509 400 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 ADD2P35612 726 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 CDK7P50613 346 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 C16orf59Q7L2K0 433 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 VTI1AQ96AJ9 217 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 KIF1BPQ96EK5 621 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 ASB2Q96Q27 587 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.19□□□□□ -0.142e-12■■■□□ 15
GTF3C1-209ENST00000568569 PRDM12Q9H4Q4 367 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 CHD7Q9P2D1 2997 aa14.19□□□□□ -0.14
GTF3C1-209ENST00000568569 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 GRXCR1A8MXD5 290 aa14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 ASGR1P07306 291 aa14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 ACVR2BQ13705 512 aa14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 RAB30Q15771 203 aa14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 PAG1Q9NWQ8 432 aa14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-209ENST00000568569 ARVCFO00192 962 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 APBB1O00213 710 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 ATP2A1O14983 1001 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 TLR3O15455 904 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 MRPS5P82675 430 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 SLFNL1Q499Z3 407 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 ZNF365Q70YC5 407 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 FAM126BQ8IXS8 530 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 ADAMTS19Q8TE59 1207 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 NUP88Q99567 741 aaPredicted RBP14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 PPP1R12CQ9BZL4 782 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 UPF3AQ9H1J1 476 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 MTIF3Q9H2K0 278 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 ABHD16BQ9H3Z7 469 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 MSRAQ9UJ68 235 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 RIPK3Q9Y572 518 aa14.17□□□□□ -0.14
GTF3C1-209ENST00000568569 ZBED9Q6R2W3 1325 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 PARP14Q460N5 1801 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 ADCY6O43306 1168 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 ACRP10323 421 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 GJA9P57773 515 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 IRX5P78411 483 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 ADGRE1Q14246 886 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 UBE3CQ15386 1083 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 CCDC144BQ3MJ40 725 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 CTR9Q6PD62 1173 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 PRPF38AQ8NAV1 312 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 UHRF1Q96T88 793 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 BOLA2Q9H3K6 86 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 ARPP21Q9UBL0 812 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 CTDP1Q9Y5B0 961 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 MYO9BQ13459 2157 aa14.16□□□□□ -0.14
GTF3C1-209ENST00000568569 F5H6K3 240 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 ZBED4O75132 1171 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 NDUFB10O96000 172 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 IGFBP4P22692 258 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 KLRC3Q07444 240 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 ARMCX2Q7L311 632 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 CPXCR1Q8N123 301 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 ANKRD35Q8N283 1001 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 BCL11AQ9H165 835 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 IL23AQ9NPF7 189 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 FBXO40Q9UH90 709 aa14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 ZNFX1Q9P2E3 1918 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-209ENST00000568569 COL11A1P12107 1806 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms