RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 IFNAR2P48551 515 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 CACNA2D3Q8IZS8 1091 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 MSANTD4Q8NCY6 345 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 EIF3HO15372 352 aaKnown RBP eCLIP12.12□□□□□ -0.47
PALB2-206ENST00000568219 EPHB4P54760 987 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 NAA35Q5VZE5 725 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 AGPAT5Q9NUQ2 364 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 HYOU1Q9Y4L1 999 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
PALB2-206ENST00000568219 PDE6AP16499 860 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 SCP2P22307 547 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 LETM2Q2VYF4 491 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 MGARPQ8TDB4 240 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 PTPRMP28827 1452 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 H7C1D1 291 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 KCNK3O14649 394 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 ITGA6P23229 1130 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 DNM2P50570 870 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 TNNC1P63316 161 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 MS4A14Q96JA4 679 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 TSGA10Q9BZW7 698 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 SLC52A2Q9HAB3 445 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 KCND1Q9NSA2 647 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
PALB2-206ENST00000568219 USP6P35125 1406 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 MEFVO15553 781 aaPredicted RBP12.11□□□□□ -0.47
PALB2-206ENST00000568219 SLC5A1P13866 664 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 PTPAQ15257 358 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
PALB2-206ENST00000568219 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 STIM2Q9P246 746 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
PALB2-206ENST00000568219 PACSIN2Q9UNF0 486 aaPredicted RBP12.11□□□□□ -0.47
PALB2-206ENST00000568219 SKAP2O75563 359 aaPredicted RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 TCP1P17987 556 aaKnown RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 PRCPP42785 496 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 PHKA1P46020 1223 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 MEX3CQ5U5Q3 659 aaKnown RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 TMEM139Q8IV31 216 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 THOC1Q96FV9 657 aaKnown RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 TSG101Q99816 390 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 LACRTQ9GZZ8 138 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 TRAF5O00463 557 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 NEFHP12036 1026 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 KRT13P13646 458 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 EIF4A3P38919 411 aaKnown RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 FAM133BQ5BKY9 247 aaKnown RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 SPATA4Q8NEY3 305 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 CALML4Q96GE6 196 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 SAMD15Q9P1V8 674 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 FBXO2Q9UK22 296 aaPredicted RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 MYBL2P10244 700 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 MB21D1Q8N884 522 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 FOXP1Q9H334 677 aaPredicted RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 KCNK9Q9NPC2 374 aa12.1□□□□□ -0.47
PALB2-206ENST00000568219 NOVA2Q9UNW9 492 aaKnown RBP12.1□□□□□ -0.47
PALB2-206ENST00000568219 TBC1D1Q86TI0 1168 aaPredicted RBP12.09□□□□□ -0.47
PALB2-206ENST00000568219 SYNE4Q8N205 404 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
PALB2-206ENST00000568219 COL15A1P39059 1388 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 TNKSO95271 1327 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 NEDD4P46934 1319 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 A6NNZ2 444 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 SYF2O95926 243 aaKnown RBP12.09□□□□□ -0.47
PALB2-206ENST00000568219 IFNAR1P17181 557 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 KLK7P49862 253 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 KIAA0753Q2KHM9 967 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 TUBB8Q3ZCM7 444 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 OR2W6PQ8NHA6 318 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 GPKOWQ92917 476 aaPredicted RBP eCLIP12.09□□□□□ -0.47
PALB2-206ENST00000568219 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 CD2APQ9Y5K6 639 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 AMPD3Q01432 767 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
PALB2-206ENST00000568219 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 CNOT6LQ96LI5 555 aaKnown RBP12.09□□□□□ -0.47
PALB2-206ENST00000568219 CCT8L2Q96SF2 557 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 PYM1Q9BRP8 204 aaKnown RBP12.09□□□□□ -0.47
PALB2-206ENST00000568219 HSD3B7Q9H2F3 369 aa12.09□□□□□ -0.47
PALB2-206ENST00000568219 NRXN1Q9ULB1 1477 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms