RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 NDUFB10O96000 172 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 IRX5P78411 483 aaPredicted RBP27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 KLRC3Q07444 240 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 ZNF697Q5TEC3 545 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 KBTBD3Q8NAB2 608 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 NYAP2Q9P242 653 aa27.46■■□□□ 1.99
CNEP1R1-209ENST00000567712 SNRNP48Q6IEG0 339 aaKnown RBP27.45■■□□□ 1.98
CNEP1R1-209ENST00000567712 TTYH1Q9H313 450 aaPredicted RBP27.45■■□□□ 1.98
CNEP1R1-209ENST00000567712 DNAJC25-GNG10A0A024R161 153 aa27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 M0R2C6 588 aa27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 AKR1A1P14550 325 aa27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 RNF180Q86T96 592 aa27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 CDX2Q99626 313 aaPredicted RBP27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 COL25A1Q9BXS0 654 aaPredicted RBP27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 SEMA6BQ9H3T3 888 aa27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 CHMP4BQ9H444 224 aaKnown RBP27.44■■□□□ 1.98
CNEP1R1-209ENST00000567712 MYADML2A6NDP7 307 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 ADCY6O43306 1168 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 PRDM1O75626 825 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 CLTBP09497 229 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 APPBP2Q92624 585 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 FGD4Q96M96 766 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 TEX13BQ9BXU2 312 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 MKNK2Q9HBH9 465 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 CLIP2Q9UDT6 1046 aa27.43■■□□□ 1.98
CNEP1R1-209ENST00000567712 RNF113AO15541 343 aaKnown RBP27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 GPAA1O43292 621 aa27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 PQBP1O60828 265 aaKnown RBP27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 SLC4A3P48751 1232 aa27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 GIMAP6Q6P9H5 292 aa27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 CPXCR1Q8N123 301 aa27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 TACC3Q9Y6A5 838 aa27.42■■□□□ 1.98
CNEP1R1-209ENST00000567712 SYNRGQ9UMZ2 1314 aa27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 KIAA0355O15063 1070 aa27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 COPB2P35606 906 aa27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 CCSAPQ6IQ19 270 aaPredicted RBP27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 KLHDC9Q8NEP7 349 aa27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 DCTPP1Q9H773 170 aa27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 RAVER2Q9HCJ3 691 aaKnown RBP27.41■■□□□ 1.98
CNEP1R1-209ENST00000567712 FAAP100Q0VG06 881 aa27.4■■□□□ 1.98
CNEP1R1-209ENST00000567712 MAMDC4Q6UXC1 1216 aa27.4■■□□□ 1.98
CNEP1R1-209ENST00000567712 PRPF38AQ8NAV1 312 aaKnown RBP27.4■■□□□ 1.98
CNEP1R1-209ENST00000567712 CEP95Q96GE4 821 aa27.4■■□□□ 1.98
CNEP1R1-209ENST00000567712 SEC62Q99442 399 aaKnown RBP27.4■■□□□ 1.98
CNEP1R1-209ENST00000567712 CNPY2Q9Y2B0 182 aa27.4■■□□□ 1.98
CNEP1R1-209ENST00000567712 ATP2A1O14983 1001 aa27.39■■□□□ 1.98
CNEP1R1-209ENST00000567712 ACLYP53396 1101 aa27.39■■□□□ 1.98
CNEP1R1-209ENST00000567712 SMAD3P84022 425 aaKnown RBP27.39■■□□□ 1.98
CNEP1R1-209ENST00000567712 KIFC2Q96AC6 838 aa27.39■■□□□ 1.98
CNEP1R1-209ENST00000567712 DDX11Q96FC9 970 aa27.39■■□□□ 1.98
CNEP1R1-209ENST00000567712 ZHX1Q9UKY1 873 aaPredicted RBP27.39■■□□□ 1.98
CNEP1R1-209ENST00000567712 SYNGAP1Q96PV0 1343 aa27.39■■□□□ 1.97
CNEP1R1-209ENST00000567712 KCNA10Q16322 511 aa27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 LRRC47Q8N1G4 583 aaKnown RBP27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 MYLIPQ8WY64 445 aa27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 MKL1Q969V6 931 aa27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 TSEN34Q9BSV6 310 aaKnown RBP27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 SLC38A10Q9HBR0 1119 aa27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 MTMR4Q9NYA4 1195 aa27.38■■□□□ 1.97
CNEP1R1-209ENST00000567712 ANKRD33Q7Z3H0 272 aa27.37■■□□□ 1.97
CNEP1R1-209ENST00000567712 MSL3Q8N5Y2 521 aaKnown RBP27.37■■□□□ 1.97
CNEP1R1-209ENST00000567712 TMEM39AQ9NV64 488 aa27.37■■□□□ 1.97
CNEP1R1-209ENST00000567712 FAM184BQ9ULE4 1060 aa27.37■■□□□ 1.97
CNEP1R1-209ENST00000567712 RAG1P15918 1043 aa27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 TDO2P48775 406 aa27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 IFNL3Q8IZI9 196 aa27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 ZNF444Q8N0Y2 327 aaPredicted RBP27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 RNPC3Q96LT9 517 aaKnown RBP27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 STARD7Q9NQZ5 370 aa27.36■■□□□ 1.97
CNEP1R1-209ENST00000567712 ZBED4O75132 1171 aa27.35■■□□□ 1.97
CNEP1R1-209ENST00000567712 OTUD7AQ8TE49 926 aaPredicted RBP27.35■■□□□ 1.97
CNEP1R1-209ENST00000567712 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.35■■□□□ 1.97
CNEP1R1-209ENST00000567712 SPTBN5Q9NRC6 3674 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 MYO9BQ13459 2157 aa27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 PATL2C9JE40 543 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 DUSP11O75319 330 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 APPP05067 770 aa27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 ACVR2BQ13705 512 aa27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 ZNF467Q7Z7K2 595 aaPredicted RBP27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 CHMP4CQ96CF2 233 aa27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 TOX2Q96NM4 488 aa27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 KATNBL1Q9H079 304 aa27.34■■□□□ 1.97
CNEP1R1-209ENST00000567712 FPGSQ05932 587 aa27.33■■□□□ 1.97
CNEP1R1-209ENST00000567712 CCDC144BQ3MJ40 725 aa27.33■■□□□ 1.97
CNEP1R1-209ENST00000567712 GMCL1P1Q8NEA9 526 aa27.33■■□□□ 1.97
CNEP1R1-209ENST00000567712 MAFAQ8NHW3 353 aaPredicted RBP27.33■■□□□ 1.97
CNEP1R1-209ENST00000567712 FEM1BQ9UK73 627 aa27.33■■□□□ 1.97
CNEP1R1-209ENST00000567712 MOXD2PA6NHM9 499 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 CTAGE5O15320 804 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 TTLL1O95922 423 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 ZFYP08048 801 aaPredicted RBP27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 GNAT2P19087 354 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 CDK7P50613 346 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 CNTN2Q02246 1040 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 SLFN13Q68D06 897 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 ARMCX2Q7L311 632 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 ANKRD35Q8N283 1001 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 NEDD1Q8NHV4 660 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms