RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	ZNF543	Q08ER8	600 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	CASC1	Q6TDU7	716 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	KCTD1	Q719H9	257 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	FAM160B2	Q86V87	743 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	ABRA	Q8N0Z2	381 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	SLAIN1	Q8ND83	568 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	NCOA7	Q8NI08	942 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	IGDCC4	Q8TDY8	1250 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	SOCS4	Q8WXH5	440 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	MTA3	Q9BTC8	594 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	MROH8	Q9H579	483 aa		19.47	■□□□□ 0.71
INO80E-210	ENST00000567705	SLC15A5	A6NIM6	579 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	EPB41L2	O43491	1005 aa	Known RBP	19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	ERCC3	P19447	782 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	GRK4	P32298	578 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	RASEF	Q8IZ41	740 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	PNMA1	Q8ND90	353 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	RAET1E	Q8TD07	263 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	SH3TC2	Q8TF17	1288 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	CHURC1	Q8WUH1	139 aa		19.46	■□□□□ 0.71
INO80E-210	ENST00000567705	RBBP6	Q7Z6E9	1792 aa	Known RBP	19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	STRN	O43815	780 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	ADCY3	O60266	1144 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	SLC25A27	O95847	323 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	STAT3	P40763	770 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	TRDN	Q13061	729 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	TTBK2	Q6IQ55	1244 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	NUDT12	Q9BQG2	462 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	TMEM106C	Q9BVX2	250 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	TEX13B	Q9BXU2	312 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	SENP2	Q9HC62	589 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	PRR12	Q9ULL5	1215 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	RIPK3	Q9Y572	518 aa		19.45	■□□□□ 0.7
INO80E-210	ENST00000567705	TNRC18	O15417	2968 aa	Predicted RBP	19.44	■□□□□ 0.7
INO80E-210	ENST00000567705	MAP2K5	Q13163	448 aa		19.44	■□□□□ 0.7
INO80E-210	ENST00000567705	MAP3K21	Q5TCX8	1036 aa		19.44	■□□□□ 0.7
INO80E-210	ENST00000567705	KIFC2	Q96AC6	838 aa		19.44	■□□□□ 0.7
INO80E-210	ENST00000567705	UBAC1	Q9BSL1	405 aa		19.44	■□□□□ 0.7
INO80E-210	ENST00000567705	RANBP17	Q9H2T7	1088 aa	Known RBP	19.44	■□□□□ 0.7
INO80E-210	ENST00000567705	ELN	P15502	786 aa		19.43	■□□□□ 0.7
INO80E-210	ENST00000567705	HSPA4	P34932	840 aa		19.43	■□□□□ 0.7
INO80E-210	ENST00000567705	GPATCH4	Q5T3I0	446 aa	Known RBP	19.43	■□□□□ 0.7
INO80E-210	ENST00000567705	TRIB2	Q92519	343 aa		19.43	■□□□□ 0.7
INO80E-210	ENST00000567705	ZBED4	O75132	1171 aa		19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	COPB2	P35606	906 aa		19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	TROAP	Q12815	778 aa		19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	IFIT1B	Q5T764	474 aa	Known RBP	19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	RALYL	Q86SE5	291 aa	Known RBP	19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	APBA2	Q99767	749 aa		19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	KAT14	Q9H8E8	782 aa		19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	LY9	Q9HBG7	655 aa		19.42	■□□□□ 0.7
INO80E-210	ENST00000567705	COBL	O75128	1261 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	EN2	P19622	333 aa	Predicted RBP	19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	ADORA2A	P29274	412 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	SLC16A2	P36021	539 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	RGS2	P41220	211 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	EXOSC10	Q01780	885 aa	Known RBP	19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	PLS1	Q14651	629 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	MTFR1	Q15390	333 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	ADCK5	Q3MIX3	580 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	SNRNP48	Q6IEG0	339 aa	Known RBP	19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	CHST3	Q7LGC8	479 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	NPLOC4	Q8TAT6	608 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	RAVER2	Q9HCJ3	691 aa	Known RBP	19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	FLRT1	Q9NZU1	646 aa		19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	FRMPD2	Q68DX3	1309 aa	Predicted RBP	19.41	■□□□□ 0.7
INO80E-210	ENST00000567705	DNAJC25-GNG10	A0A024R161	153 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	PALM3	A6NDB9	673 aa	Predicted RBP	19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	HMGCR	P04035	888 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	INHA	P05111	366 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	CYP2B6	P20813	491 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	MCM5	P33992	734 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	CCL14	Q16627	93 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	ASPRV1	Q53RT3	343 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	SYDE2	Q5VT97	1194 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	RNF20	Q5VTR2	975 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	NCAPG2	Q86XI2	1143 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	TRMT44	Q8IYL2	757 aa	Known RBP	19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	CHMP4C	Q96CF2	233 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	GPHN	Q9NQX3	736 aa	Predicted RBP	19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	MAD2L2	Q9UI95	211 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	WDR19	Q8NEZ3	1342 aa		19.4	■□□□□ 0.7
INO80E-210	ENST00000567705	KIAA0100	Q14667	2235 aa	Known RBP	19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	SH2B2	O14492	632 aa	Predicted RBP	19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	IFIT3	O14879	490 aa	Known RBP	19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	PRC1	O43663	620 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	REC8	O95072	547 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	MYC	P01106	439 aa	Predicted RBP	19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	LIFR	P42702	1097 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	TRIM32	Q13049	653 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	CCDC96	Q2M329	555 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	SLC35G1	Q2M3R5	365 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	SAMD1	Q6SPF0	538 aa	Predicted RBP	19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	CCAR1	Q8IX12	1150 aa	Known RBP	19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	CHST13	Q8NET6	341 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	MTMR8	Q96EF0	704 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	TMEM87B	Q96K49	555 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	AGBL1	Q96MI9	1066 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	USP26	Q9BXU7	913 aa		19.39	■□□□□ 0.69
INO80E-210	ENST00000567705	GPCPD1	Q9NPB8	672 aa		19.39	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms