RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 AAMPQ13685 434 aa17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 KIFC2Q96AC6 838 aa17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 TINF2Q9BSI4 451 aa17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 FEM1BQ9UK73 627 aa17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 RIPK3Q9Y572 518 aa17.89■□□□□ 0.45
SCAMP2-209ENST00000567638 ZBED4O75132 1171 aa17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 BMP3P12645 472 aa17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 ATN1P54259 1190 aaPredicted RBP17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 CPXCR1Q8N123 301 aa17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 SLC38A10Q9HBR0 1119 aa17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 HELLSQ9NRZ9 838 aa17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 CTDP1Q9Y5B0 961 aaPredicted RBP17.88■□□□□ 0.45
SCAMP2-209ENST00000567638 LAMA4Q16363 1823 aa17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 CTDSPL2Q05D32 466 aa17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 PPP4R3BQ5MIZ7 849 aa17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 VPS53Q5VIR6 699 aa17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 UBE2OQ9C0C9 1292 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 RAVER2Q9HCJ3 691 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 ANAPC4Q9UJX5 808 aa17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 SZT2Q5T011 3432 aa17.87■□□□□ 0.45
SCAMP2-209ENST00000567638 DNAJC25-GNG10A0A024R161 153 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 TSPY2A6NKD2 308 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 OAZ1P54368 228 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 RTP1P59025 263 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 LRRC41Q15345 812 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 TICAM2Q86XR7 235 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 TDHQ8IZJ6 230 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 DDX11Q96FC9 970 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 LRCH3Q96II8 777 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 LNPKQ9C0E8 428 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 XPNPEP3Q9NQH7 507 aa17.86■□□□□ 0.45
SCAMP2-209ENST00000567638 A0A0D9SFI3 127 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 LRRC37A2A6NM11 1700 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 ZNF865P0CJ78 1059 aaPredicted RBP17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 FDX1P10109 184 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 RARBP10826 455 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 AKR1A1P14550 325 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 TAL1P17542 331 aaPredicted RBP17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 STAT2P52630 851 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 ALX1Q15699 326 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 SLC39A5Q6ZMH5 540 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 SMC5Q8IY18 1101 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 FAM227BQ96M60 508 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 SYNGAP1Q96PV0 1343 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 FBXO40Q9UH90 709 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 ISY1Q9ULR0 285 aaKnown RBP17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 STX8Q9UNK0 236 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 CNPY2Q9Y2B0 182 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 TACC3Q9Y6A5 838 aa17.85■□□□□ 0.45
SCAMP2-209ENST00000567638 LCTP09848 1927 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 ORC4O43929 436 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 ADCYAP1R1P41586 468 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 SLC1A4P43007 532 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 MDM2Q00987 491 aaPredicted RBP17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 SNX17Q15036 470 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 MAMDC4Q6UXC1 1216 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 CHST13Q8NET6 341 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 IL17RBQ9NRM6 502 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 ATP11BQ9Y2G3 1177 aa17.84■□□□□ 0.45
SCAMP2-209ENST00000567638 ZMYM6O95789 1325 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 RANBP6O60518 1105 aaKnown RBP17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 NMT2O60551 498 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 MCCP23508 829 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 ZNF467Q7Z7K2 595 aaPredicted RBP17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 ANKRD35Q8N283 1001 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 CHURC1Q8WUH1 139 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 STAG1Q8WVM7 1258 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 PRKAG2Q9UGJ0 569 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 PHF24Q9UPV7 400 aa17.83■□□□□ 0.44
SCAMP2-209ENST00000567638 PLA2G6O60733 806 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 PGK1P00558 417 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 FGRP09769 529 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 NOVP48745 357 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 IKQ13123 557 aaPredicted RBP17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 NMIQ13287 307 aaPredicted RBP17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 TRIM60Q495X7 471 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 C1orf53Q5VUE5 145 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 RNF180Q86T96 592 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 LENG1Q96BZ8 264 aaPredicted RBP17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 CHMP4CQ96CF2 233 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 FGD4Q96M96 766 aa17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 LBHD1Q9BQE6 289 aaPredicted RBP17.82■□□□□ 0.44
SCAMP2-209ENST00000567638 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms