RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 PLA2G6O60733 806 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 NDUFB10O96000 172 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 ELNP15502 786 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 CASTP20810 708 aaKnown RBP19.55■□□□□ 0.72
CLN6-208ENST00000567060 RPS6KB1P23443 525 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 FLT3LGP49771 235 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 RCAN1P53805 252 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 ZYXQ15942 572 aaKnown RBP19.55■□□□□ 0.72
CLN6-208ENST00000567060 SLFN13Q68D06 897 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 RUFY3Q7L099 469 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 SGMS1Q86VZ5 419 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 LRRC47Q8N1G4 583 aaKnown RBP19.55■□□□□ 0.72
CLN6-208ENST00000567060 PNMA1Q8ND90 353 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 MAP3K14Q99558 947 aa19.55■□□□□ 0.72
CLN6-208ENST00000567060 SH2B2O14492 632 aaPredicted RBP19.54■□□□□ 0.72
CLN6-208ENST00000567060 SNHG28P0DPA3 235 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 FDX1P10109 184 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 SLC1A4P43007 532 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 GCLCP48506 637 aaPredicted RBP19.54■□□□□ 0.72
CLN6-208ENST00000567060 IRX3P78415 501 aaPredicted RBP19.54■□□□□ 0.72
CLN6-208ENST00000567060 TREML2Q5T2D2 321 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 GPATCH4Q5T3I0 446 aaKnown RBP19.54■□□□□ 0.72
CLN6-208ENST00000567060 LBX2Q6XYB7 198 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 SLC17A8Q8NDX2 589 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 AGXT2Q9BYV1 514 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
CLN6-208ENST00000567060 HOXC10Q9NYD6 342 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 MGAMO43451 1857 aa19.54■□□□□ 0.72
CLN6-208ENST00000567060 DLL1O00548 723 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 DDAH1O94760 285 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 CALM1P0DP23 149 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 CALM2P0DP24 149 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 CALM3P0DP25 149 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 BMP3P12645 472 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 COG2Q14746 738 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 FAM160B2Q86V87 743 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 ALDH8A1Q9H2A2 487 aaPredicted RBP19.53■□□□□ 0.72
CLN6-208ENST00000567060 LY9Q9HBG7 655 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 FEM1BQ9UK73 627 aa19.53■□□□□ 0.72
CLN6-208ENST00000567060 CCDC69A6NI79 296 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 TFRCP02786 760 aaKnown RBP19.52■□□□□ 0.72
CLN6-208ENST00000567060 INHAP05111 366 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 PDHBP11177 359 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 IRF5Q13568 498 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 ASPRV1Q53RT3 343 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 MB21D1Q8N884 522 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 PXYLP1Q8TE99 480 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 CHURC1Q8WUH1 139 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 LRCH3Q96II8 777 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 DEFB118Q96PH6 123 aa19.52■□□□□ 0.72
CLN6-208ENST00000567060 ASCC2Q9H1I8 757 aaPredicted RBP19.52■□□□□ 0.72
CLN6-208ENST00000567060 A0A1W2PPC1 479 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 EVI5O60447 810 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 FGD1P98174 961 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 PPP2R5BQ15173 497 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 KIAA1755Q5JYT7 1200 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 SYNE3Q6ZMZ3 975 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 CHST3Q7LGC8 479 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 SPICE1Q8N0Z3 855 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 SMCR8Q8TEV9 937 aaPredicted RBP19.51■□□□□ 0.71
CLN6-208ENST00000567060 TANGO6Q9C0B7 1094 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 CRISPLD2Q9H0B8 497 aa19.51■□□□□ 0.71
CLN6-208ENST00000567060 PAK6Q9NQU5 681 aaPredicted RBP19.51■□□□□ 0.71
CLN6-208ENST00000567060 RAD21O60216 631 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 STAT2P52630 851 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 ANKRD1Q15327 319 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 FAM83BQ5T0W9 1011 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 BTNL9Q6UXG8 535 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 PRPF38AQ8NAV1 312 aaKnown RBP19.5■□□□□ 0.71
CLN6-208ENST00000567060 TBC1D32Q96NH3 1257 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 PNMA2Q9UL42 364 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 SLC12A7Q9Y666 1083 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 DOCK3Q8IZD9 2030 aa19.5■□□□□ 0.71
CLN6-208ENST00000567060 FLOT1O75955 427 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 PARP1P09874 1014 aaKnown RBP19.49■□□□□ 0.71
CLN6-208ENST00000567060 DSG3P32926 999 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 KIF5BP33176 963 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 EVCP57679 992 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 HERVK_113P62684 666 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 ZNF543Q08ER8 600 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 TROAPQ12815 778 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 ZNF654Q8IZM8 581 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 PAWRQ96IZ0 340 aaKnown RBP19.49■□□□□ 0.71
CLN6-208ENST00000567060 SLF1Q9BQI6 1058 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 PPP1R9AQ9ULJ8 1098 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 ADAMTS5Q9UNA0 930 aa19.49■□□□□ 0.71
CLN6-208ENST00000567060 PARP14Q460N5 1801 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 TNPO2O14787 897 aaKnown RBP19.48■□□□□ 0.71
CLN6-208ENST00000567060 CAPN2P17655 700 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 SMARCA1P28370 1054 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 GNAQP50148 359 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 FAM110CQ1W6H9 321 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 CCDC96Q2M329 555 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 Q6ZUG5 572 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 PDRG1Q9NUG6 133 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 RABGAP1Q9Y3P9 1069 aa19.48■□□□□ 0.71
CLN6-208ENST00000567060 RLFQ13129 1914 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms