RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 KIFC2Q96AC6 838 aa12.01□□□□□ -0.49
HMGN2P40-201ENST00000566875 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
HMGN2P40-201ENST00000566875 SLC38A10Q9HBR0 1119 aa12.01□□□□□ -0.49
HMGN2P40-201ENST00000566875 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
HMGN2P40-201ENST00000566875 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
HMGN2P40-201ENST00000566875 NAV1Q8NEY1 1877 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 TMEM232C9JQI7 657 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 HIP1O00291 1037 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 ORC4O43929 436 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 PLA2G6O60733 806 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 PCP11498 1178 aaKnown RBP12□□□□□ -0.49
HMGN2P40-201ENST00000566875 CYBAP13498 195 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 MCCP23508 829 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 SLC1A4P43007 532 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 SLC4A3P48751 1232 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 OAZ1P54368 228 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 PRAMEF19Q5SWL8 479 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
HMGN2P40-201ENST00000566875 FAM160B2Q86V87 743 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 MSL3Q8N5Y2 521 aaKnown RBP12□□□□□ -0.49
HMGN2P40-201ENST00000566875 TRPV1Q8NER1 839 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 GMCL1Q96IK5 515 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 TINF2Q9BSI4 451 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 SENP6Q9GZR1 1112 aaPredicted RBP12□□□□□ -0.49
HMGN2P40-201ENST00000566875 RNF39Q9H2S5 420 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 RBM27Q9P2N5 1060 aaKnown RBP12□□□□□ -0.49
HMGN2P40-201ENST00000566875 FBXO40Q9UH90 709 aa12□□□□□ -0.49
HMGN2P40-201ENST00000566875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12□□□□□ -0.49
HMGN2P40-201ENST00000566875 TRIOBPQ9H2D6 2365 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 DNM1LO00429 736 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 FOXP2O15409 715 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 PGK2P07205 417 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 MFSD6Q6ZSS7 791 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 ANKRD35Q8N283 1001 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 TTC14Q96N46 770 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 IL17RBQ9NRM6 502 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 TOMM22Q9NS69 142 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 TCP11L1Q9NUJ3 509 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
HMGN2P40-201ENST00000566875 MYH7P12883 1935 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 DDX60LQ5H9U9 1706 aaKnown RBP11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 A0A1W2PPC1 479 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 ZNF213O14771 459 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 BMP8BP34820 402 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 NOVP48745 357 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 NT5C2P49902 561 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 STAT2P52630 851 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 IKQ13123 557 aaPredicted RBP11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 C7orf61Q8IZ16 206 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 PRO3102Q9H379 93 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 RNF41Q9H4P4 317 aaPredicted RBP11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 RAVER2Q9HCJ3 691 aaKnown RBP11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 CNPY2Q9Y2B0 182 aa11.98□□□□□ -0.49
HMGN2P40-201ENST00000566875 PLXNB2O15031 1838 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 PLIN4Q96Q06 1357 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 PFASO15067 1338 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 RARBP10826 455 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 TOP1P11387 765 aaKnown RBP11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 TKFCQ3LXA3 575 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 RRP12Q5JTH9 1297 aaKnown RBP11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
HMGN2P40-201ENST00000566875 DNAJC25-GNG10A0A024R161 153 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 NMT2O60551 498 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 LRRC26Q2I0M4 334 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 CCDC178Q5BJE1 867 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 ANO1Q5XXA6 986 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 KCTD1Q719H9 257 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 RNF180Q86T96 592 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 ZNF589Q86UQ0 364 aaPredicted RBP11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 DCAF4Q8WV16 495 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 GDF15Q99988 308 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 CTNNA3Q9UI47 895 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 ZMYND8Q9ULU4 1186 aaPredicted RBP11.96□□□□□ -0.49
HMGN2P40-201ENST00000566875 RANBP2P49792 3224 aaKnown RBP11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 ZMYM6O95789 1325 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 AKR1A1P14550 325 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 HAND2P61296 217 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 LRRC41Q15345 812 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 SLC39A5Q6ZMH5 540 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 ESR2Q92731 530 aa11.95□□□□□ -0.5
HMGN2P40-201ENST00000566875 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms