RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SLC39A5Q6ZMH5 540 aa32.91■■■□□ 2.86
UBFD1-206ENST00000566669 RNF180Q86T96 592 aa32.91■■■□□ 2.86
UBFD1-206ENST00000566669 DDX11Q96FC9 970 aa32.91■■■□□ 2.86
UBFD1-206ENST00000566669 LRCH3Q96II8 777 aa32.91■■■□□ 2.86
UBFD1-206ENST00000566669 NUP88Q99567 741 aaPredicted RBP32.91■■■□□ 2.86
UBFD1-206ENST00000566669 PGK2P07205 417 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 AKR1A1P14550 325 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 PPARAQ07869 468 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 SNX17Q15036 470 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 LRRC41Q15345 812 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 PRAMEF19Q5SWL8 479 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 ZNF467Q7Z7K2 595 aaPredicted RBP32.9■■■□□ 2.86
UBFD1-206ENST00000566669 XPNPEP3Q9NQH7 507 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 SYNGAP1Q96PV0 1343 aa32.9■■■□□ 2.86
UBFD1-206ENST00000566669 COL11A1P12107 1806 aaPredicted RBP32.89■■■□□ 2.86
UBFD1-206ENST00000566669 PRDM1O75626 825 aa32.89■■■□□ 2.86
UBFD1-206ENST00000566669 SLC38A10Q9HBR0 1119 aa32.89■■■□□ 2.86
UBFD1-206ENST00000566669 MDM2Q00987 491 aaPredicted RBP32.88■■■□□ 2.85
UBFD1-206ENST00000566669 CHST13Q8NET6 341 aa32.88■■■□□ 2.85
UBFD1-206ENST00000566669 EVI5LQ96CN4 794 aa32.88■■■□□ 2.85
UBFD1-206ENST00000566669 FAM47AQ5JRC9 791 aa32.87■■■□□ 2.85
UBFD1-206ENST00000566669 ANO1Q5XXA6 986 aa32.87■■■□□ 2.85
UBFD1-206ENST00000566669 MAMDC4Q6UXC1 1216 aa32.87■■■□□ 2.85
UBFD1-206ENST00000566669 PHF24Q9UPV7 400 aa32.87■■■□□ 2.85
UBFD1-206ENST00000566669 ATP11BQ9Y2G3 1177 aa32.87■■■□□ 2.85
UBFD1-206ENST00000566669 SALL3Q9BXA9 1300 aa32.86■■■□□ 2.85
UBFD1-206ENST00000566669 BMP3P12645 472 aa32.86■■■□□ 2.85
UBFD1-206ENST00000566669 TFAP4Q01664 338 aa32.86■■■□□ 2.85
UBFD1-206ENST00000566669 CHURC1Q8WUH1 139 aa32.86■■■□□ 2.85
UBFD1-206ENST00000566669 KIFC2Q96AC6 838 aa32.86■■■□□ 2.85
UBFD1-206ENST00000566669 SEC62Q99442 399 aaKnown RBP32.86■■■□□ 2.85
UBFD1-206ENST00000566669 ZNFX1Q9P2E3 1918 aaKnown RBP32.86■■■□□ 2.85
UBFD1-206ENST00000566669 DNAJC25-GNG10A0A024R161 153 aa32.85■■■□□ 2.85
UBFD1-206ENST00000566669 MYCNP04198 464 aaPredicted RBP32.85■■■□□ 2.85
UBFD1-206ENST00000566669 ADCYAP1R1P41586 468 aa32.85■■■□□ 2.85
UBFD1-206ENST00000566669 HDAC1Q13547 482 aaPredicted RBP32.85■■■□□ 2.85
UBFD1-206ENST00000566669 ANKRD45Q5TZF3 282 aa32.85■■■□□ 2.85
UBFD1-206ENST00000566669 SLFN13Q68D06 897 aa32.85■■■□□ 2.85
UBFD1-206ENST00000566669 FAM160B2Q86V87 743 aa32.85■■■□□ 2.85
UBFD1-206ENST00000566669 OTUD7AQ8TE49 926 aaPredicted RBP32.85■■■□□ 2.85
UBFD1-206ENST00000566669 GMCL1Q96IK5 515 aa32.85■■■□□ 2.85
UBFD1-206ENST00000566669 ZNF865P0CJ78 1059 aaPredicted RBP32.84■■■□□ 2.85
UBFD1-206ENST00000566669 STAT2P52630 851 aa32.84■■■□□ 2.85
UBFD1-206ENST00000566669 CPXCR1Q8N123 301 aa32.84■■■□□ 2.85
UBFD1-206ENST00000566669 TSEN34Q9BSV6 310 aaKnown RBP32.84■■■□□ 2.85
UBFD1-206ENST00000566669 FAM184BQ9ULE4 1060 aa32.84■■■□□ 2.85
UBFD1-206ENST00000566669 PLA2G6O60733 806 aa32.83■■■□□ 2.85
UBFD1-206ENST00000566669 ANKRD35Q8N283 1001 aa32.83■■■□□ 2.85
UBFD1-206ENST00000566669 HELLSQ9NRZ9 838 aa32.83■■■□□ 2.85
UBFD1-206ENST00000566669 LRRC47Q8N1G4 583 aaKnown RBP32.82■■■□□ 2.84
UBFD1-206ENST00000566669 DEFB123Q8N688 67 aa32.82■■■□□ 2.84
UBFD1-206ENST00000566669 ANAPC4Q9UJX5 808 aa32.82■■■□□ 2.84
UBFD1-206ENST00000566669 RIPK3Q9Y572 518 aa32.82■■■□□ 2.84
UBFD1-206ENST00000566669 MYH4Q9Y623 1939 aa32.82■■■□□ 2.84
UBFD1-206ENST00000566669 TSPY2A6NKD2 308 aa32.81■■■□□ 2.84
UBFD1-206ENST00000566669 PLXNA1Q9UIW2 1896 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 SLC1A4P43007 532 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 ALX1Q15699 326 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 TKFCQ3LXA3 575 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 NUP133Q8WUM0 1156 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 STAG1Q8WVM7 1258 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 ABHD16BQ9H3Z7 469 aa32.8■■■□□ 2.84
UBFD1-206ENST00000566669 RAVER2Q9HCJ3 691 aaKnown RBP32.8■■■□□ 2.84
UBFD1-206ENST00000566669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.8■■■□□ 2.84
UBFD1-206ENST00000566669 TMEM232C9JQI7 657 aa32.79■■■□□ 2.84
UBFD1-206ENST00000566669 TRIM60Q495X7 471 aa32.79■■■□□ 2.84
UBFD1-206ENST00000566669 STX8Q9UNK0 236 aa32.79■■■□□ 2.84
UBFD1-206ENST00000566669 TACC3Q9Y6A5 838 aa32.79■■■□□ 2.84
UBFD1-206ENST00000566669 MOXD2PA6NHM9 499 aa32.78■■■□□ 2.84
UBFD1-206ENST00000566669 TAL1P17542 331 aaPredicted RBP32.78■■■□□ 2.84
UBFD1-206ENST00000566669 PDE1AP54750 535 aa32.78■■■□□ 2.84
UBFD1-206ENST00000566669 FAM109BQ6ICB4 259 aaPredicted RBP32.78■■■□□ 2.84
UBFD1-206ENST00000566669 FERMT2Q96AC1 680 aa32.78■■■□□ 2.84
UBFD1-206ENST00000566669 SPC25Q9HBM1 224 aa32.78■■■□□ 2.84
UBFD1-206ENST00000566669 DUSP11O75319 330 aaKnown RBP32.77■■■□□ 2.84
UBFD1-206ENST00000566669 PGK1P00558 417 aa32.77■■■□□ 2.84
UBFD1-206ENST00000566669 SLC4A3P48751 1232 aa32.77■■■□□ 2.84
UBFD1-206ENST00000566669 IKQ13123 557 aaPredicted RBP32.77■■■□□ 2.84
UBFD1-206ENST00000566669 CRBNQ96SW2 442 aa32.77■■■□□ 2.84
UBFD1-206ENST00000566669 ACAD9Q9H845 621 aa32.77■■■□□ 2.84
UBFD1-206ENST00000566669 PRDM5Q9NQX1 630 aaPredicted RBP32.77■■■□□ 2.84
UBFD1-206ENST00000566669 ISY1Q9ULR0 285 aaKnown RBP32.77■■■□□ 2.84
UBFD1-206ENST00000566669 ORC4O43929 436 aa32.76■■■□□ 2.83
UBFD1-206ENST00000566669 ADAMTS4O75173 837 aa32.76■■■□□ 2.83
UBFD1-206ENST00000566669 SNAI1O95863 264 aaPredicted RBP32.76■■■□□ 2.83
UBFD1-206ENST00000566669 PDLIM7Q9NR12 457 aa32.76■■■□□ 2.83
UBFD1-206ENST00000566669 ZHX1Q9UKY1 873 aaPredicted RBP32.76■■■□□ 2.83
UBFD1-206ENST00000566669 A0A1W2PQ45 241 aaPredicted RBP32.75■■■□□ 2.83
UBFD1-206ENST00000566669 A0A1W2PQY0 241 aa32.75■■■□□ 2.83
UBFD1-206ENST00000566669 ACVR2BQ13705 512 aa32.75■■■□□ 2.83
UBFD1-206ENST00000566669 RCSD1Q6JBY9 416 aa32.75■■■□□ 2.83
UBFD1-206ENST00000566669 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.75■■■□□ 2.83
UBFD1-206ENST00000566669 FGRP09769 529 aa32.74■■■□□ 2.83
UBFD1-206ENST00000566669 TLE2Q04725 743 aa32.74■■■□□ 2.83
UBFD1-206ENST00000566669 MCMDC2Q4G0Z9 681 aa32.74■■■□□ 2.83
UBFD1-206ENST00000566669 PCSK9Q8NBP7 692 aaKnown RBP32.74■■■□□ 2.83
UBFD1-206ENST00000566669 TOX2Q96NM4 488 aa32.74■■■□□ 2.83
UBFD1-206ENST00000566669 STXBP5LQ9Y2K9 1186 aa32.74■■■□□ 2.83
UBFD1-206ENST00000566669 ZMYM6O95789 1325 aa32.74■■■□□ 2.83
UBFD1-206ENST00000566669 FOXP2O15409 715 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms