RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 PLXNA1Q9UIW2 1896 aa14.23□□□□□ -0.13
UBR1-206ENST00000566493 ZBED4O75132 1171 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 PRDM1O75626 825 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 NDUFB10O96000 172 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 RARBP10826 455 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 RTP1P59025 263 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 SNRNP48Q6IEG0 339 aaKnown RBP14.22□□□□□ -0.13
UBR1-206ENST00000566493 NAPBQ9H115 298 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
UBR1-206ENST00000566493 ATP11BQ9Y2G3 1177 aa14.22□□□□□ -0.13
UBR1-206ENST00000566493 TTLL1O95922 423 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 TSPY3P0CV98 308 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 TSPY8P0CW00 308 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 MX1P20591 662 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 ZNF792Q3KQV3 632 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 REPS2Q8NFH8 660 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 PI4K2BQ8TCG2 481 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 MKL1Q969V6 931 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 KIFC2Q96AC6 838 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 DDX11Q96FC9 970 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 CEP95Q96GE4 821 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 SYNPO2Q9UMS6 1093 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.13
UBR1-206ENST00000566493 IGKV6D-41A0A0C4DH26 115 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 ADCYAP1R1P41586 468 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 LRRC41Q15345 812 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 FAM47AQ5JRC9 791 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 RNF180Q86T96 592 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 CPXCR1Q8N123 301 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 OTUD7AQ8TE49 926 aaPredicted RBP14.2□□□□□ -0.14
UBR1-206ENST00000566493 FERMT2Q96AC1 680 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 SEC62Q99442 399 aaKnown RBP14.2□□□□□ -0.14
UBR1-206ENST00000566493 XPNPEP3Q9NQH7 507 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 FEM1BQ9UK73 627 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 ISY1Q9ULR0 285 aaKnown RBP14.2□□□□□ -0.14
UBR1-206ENST00000566493 DNAH12Q6ZR08 3092 aa14.2□□□□□ -0.14
UBR1-206ENST00000566493 AKR1A1P14550 325 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 RRP1P56182 461 aaKnown RBP14.19□□□□□ -0.14
UBR1-206ENST00000566493 TFAP4Q01664 338 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 PPARAQ07869 468 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 PPP4R3BQ5MIZ7 849 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 ANKRD45Q5TZF3 282 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 LRRC47Q8N1G4 583 aaKnown RBP14.19□□□□□ -0.14
UBR1-206ENST00000566493 MSL3Q8N5Y2 521 aaKnown RBP14.19□□□□□ -0.14
UBR1-206ENST00000566493 DEFB123Q8N688 67 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 PRDM5Q9NQX1 630 aaPredicted RBP14.19□□□□□ -0.14
UBR1-206ENST00000566493 SMCHD1A6NHR9 2005 aa14.19□□□□□ -0.14
UBR1-206ENST00000566493 ATP2A1O14983 1001 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 BMP3P12645 472 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 TRIM60Q495X7 471 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 ANKRD35Q8N283 1001 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 SLC38A10Q9HBR0 1119 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 RAVER2Q9HCJ3 691 aaKnown RBP14.18□□□□□ -0.14
UBR1-206ENST00000566493 FBXO40Q9UH90 709 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
UBR1-206ENST00000566493 SYNGAP1Q96PV0 1343 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 PGK1P00558 417 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 ZNF865P0CJ78 1059 aaPredicted RBP14.17□□□□□ -0.14
UBR1-206ENST00000566493 FDX1P10109 184 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
UBR1-206ENST00000566493 OAZ1P54368 228 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
UBR1-206ENST00000566493 SNX17Q15036 470 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 CHURC1Q8WUH1 139 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 FAM184BQ9ULE4 1060 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 PHF24Q9UPV7 400 aa14.17□□□□□ -0.14
UBR1-206ENST00000566493 TSPY2A6NKD2 308 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 TMEM232C9JQI7 657 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 STAT2P52630 851 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 C1orf53Q5VUE5 145 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 MAMDC4Q6UXC1 1216 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 ZNF467Q7Z7K2 595 aaPredicted RBP14.16□□□□□ -0.14
UBR1-206ENST00000566493 CHST13Q8NET6 341 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 ZHX1Q9UKY1 873 aaPredicted RBP14.16□□□□□ -0.14
UBR1-206ENST00000566493 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 PLIN4Q96Q06 1357 aa14.16□□□□□ -0.14
UBR1-206ENST00000566493 DNAJC25-GNG10A0A024R161 153 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 SLC1A4P43007 532 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 TLE2Q04725 743 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 CCDC129Q6ZRS4 1044 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 Q7L0L9 218 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 FAM160B2Q86V87 743 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 GMCL1Q96IK5 515 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
UBR1-206ENST00000566493 LTBP2Q14767 1821 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 LAMA3Q16787 3333 aa14.15□□□□□ -0.14
UBR1-206ENST00000566493 A0A1W2PQ45 241 aaPredicted RBP14.14□□□□□ -0.15
UBR1-206ENST00000566493 A0A1W2PQY0 241 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
UBR1-206ENST00000566493 SNAI1O95863 264 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms