RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 SLC25A27O95847 323 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 INHAP05111 366 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 STAT3P40763 770 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 RGS2P41220 211 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 UBXN2AP68543 259 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 TRDNQ13061 729 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 MAP2K5Q13163 448 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 GRB14Q14449 540 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 STOX1Q6ZVD7 989 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 CYB5R4Q7L1T6 521 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 DGKHQ86XP1 1220 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 RIOX2Q8IUF8 465 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 ENAHQ8N8S7 591 aaPredicted RBP15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 APBA2Q99767 749 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 TMEM106CQ9BVX2 250 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 MROH8Q9H579 483 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 SLC38A10Q9HBR0 1119 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 CTDP1Q9Y5B0 961 aaPredicted RBP15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 TNKSO95271 1327 aa15.15■□□□□ 0.02
CNEP1R1-208ENST00000566482 PLA2G6O60733 806 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 HMGCRP04035 888 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 PDHBP11177 359 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 CCL5P13501 91 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 RGS19P49795 217 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 TRIB2Q92519 343 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 ANKS1AQ92625 1134 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 UBAC1Q9BSL1 405 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 ZNF236Q9UL36 1845 aa15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
CNEP1R1-208ENST00000566482 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 SLC27A2O14975 620 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 STRNO43815 780 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 ADORA2AP29274 412 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 COPB2P35606 906 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 TRIM32Q13049 653 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 CCL14Q16627 93 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 SNRNP48Q6IEG0 339 aaKnown RBP15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 RALYLQ86SE5 291 aaKnown RBP15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 TRMT44Q8IYL2 757 aaKnown RBP15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 CPXCR1Q8N123 301 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 PNMA1Q8ND90 353 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 TEX13BQ9BXU2 312 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 UNC93B1Q9H1C4 597 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 KAT14Q9H8E8 782 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 RAVER2Q9HCJ3 691 aaKnown RBP15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 GPCPD1Q9NPB8 672 aa15.13■□□□□ 0.01
CNEP1R1-208ENST00000566482 ATP2A1O14983 1001 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 SNHG28P0DPA3 235 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 FDX1P10109 184 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 SLC16A2P36021 539 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 SNAP25P60880 206 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 NECTIN1Q15223 517 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 SEC23AQ15436 765 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 BTNL9Q6UXG8 535 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 ABRAQ8N0Z2 381 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 NPLOC4Q8TAT6 608 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 PRR12Q9ULL5 1215 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 RIPK3Q9Y572 518 aa15.12■□□□□ 0.01
CNEP1R1-208ENST00000566482 COBLO75128 1261 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 HOXC6P09630 235 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 FCER1AP12319 257 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 EN2P19622 333 aaPredicted RBP15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 OAZ1P54368 228 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 IFIT1BQ5T764 474 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 DPP9Q86TI2 863 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 MB21D2Q8IYB1 491 aaPredicted RBP15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 MMP19Q99542 508 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 FLRT1Q9NZU1 646 aa15.11■□□□□ 0.01
CNEP1R1-208ENST00000566482 IFIT3O14879 490 aaKnown RBP15.1■□□□□ 0.01
CNEP1R1-208ENST00000566482 ANTXR2P58335 489 aa15.1■□□□□ 0.01
CNEP1R1-208ENST00000566482 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
CNEP1R1-208ENST00000566482 ZNF536O15090 1300 aa15.1■□□□□ 0.01
CNEP1R1-208ENST00000566482 GJB1P08034 283 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 GOLGA8HP0CJ92 632 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 CACNB2Q08289 660 aaPredicted RBP15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 KCTD2Q14681 263 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 MAP3K21Q5TCX8 1036 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 AGBL1Q96MI9 1066 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 RANBP17Q9H2T7 1088 aaKnown RBP15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 HOMER2Q9NSB8 354 aa15.09■□□□□ 0.01
CNEP1R1-208ENST00000566482 ERICH2A1L162 156 aa15.08■□□□□ 0
CNEP1R1-208ENST00000566482 PGK2P07205 417 aa15.08■□□□□ 0
CNEP1R1-208ENST00000566482 MLLT1Q03111 559 aaPredicted RBP15.08■□□□□ 0
CNEP1R1-208ENST00000566482 COL9A3Q14050 684 aaPredicted RBP15.08■□□□□ 0
CNEP1R1-208ENST00000566482 SART3Q15020 963 aaKnown RBP15.08■□□□□ 0
CNEP1R1-208ENST00000566482 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms