RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PRDM14Q9GZV8 571 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 TYW1Q9NV66 732 aaKnown RBP7□□□□□ -1.29
CNOT1-209ENST00000566240 INTS7Q9NVH2 962 aaKnown RBP7□□□□□ -1.29
CNOT1-209ENST00000566240 ATP8A1Q9Y2Q0 1164 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 KCNQ2O43526 872 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 DLX3O60479 287 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 LRRN2O75325 713 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 BMP3P12645 472 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 SDSP20132 328 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 CYP7A1P22680 504 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 RXRBP28702 533 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 CDK5R2Q13319 367 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 SNW1Q13573 536 aaKnown RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 PPP2R5DQ14738 602 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 UVSSAQ2YD98 709 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 CT47A1Q5JQC4 288 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 GTF2IRD2BQ6EKJ0 949 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 GTF2IRD2Q86UP8 949 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 LRRTM3Q86VH5 581 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 FIBCD1Q8N539 461 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 CCDC140Q96MF4 163 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 NACC1Q96RE7 527 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 FAM126AQ9BYI3 521 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 IRF2BPLQ9H1B7 796 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 NOL6Q9H6R4 1146 aaKnown RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 MAGEC2Q9UBF1 373 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 TPX2Q9ULW0 747 aaKnown RBP6.99□□□□□ -1.29
CNOT1-209ENST00000566240 MAPRE3Q9UPY8 281 aa6.99□□□□□ -1.29
CNOT1-209ENST00000566240 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 GSG1L2A8MUP6 293 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 EOMESO95936 686 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 APBA3O96018 575 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 PDGFRBP09619 1106 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-209ENST00000566240 ITGB7P26010 798 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 MAP4P27816 1152 aaKnown RBP6.98□□□□□ -1.29
CNOT1-209ENST00000566240 HOXC12P31275 282 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 NFKB2Q00653 900 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 SF1Q15637 639 aaKnown RBP6.98□□□□□ -1.29
CNOT1-209ENST00000566240 TRIM61Q5EBN2 209 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 CNNM4Q6P4Q7 775 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 RNF180Q86T96 592 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 TOP6BLQ8N6T0 577 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 UBR7Q8N806 425 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 PRPF38AQ8NAV1 312 aaKnown RBP6.98□□□□□ -1.29
CNOT1-209ENST00000566240 TARS2Q9BW92 718 aaKnown RBP6.98□□□□□ -1.29
CNOT1-209ENST00000566240 C1GALT1Q9NS00 363 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 GFOD1Q9NXC2 390 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 SFMBT1Q9UHJ3 866 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
CNOT1-209ENST00000566240 CDKN1CP49918 316 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-209ENST00000566240 GFRA1P56159 465 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 EVA1CP58658 441 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 GABREP78334 506 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 GRB10Q13322 594 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 NFKBIBQ15653 356 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 FERMT3Q86UX7 667 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 DDX42Q86XP3 938 aaKnown RBP eCLIP6.97□□□□□ -1.29
CNOT1-209ENST00000566240 SLC7A14Q8TBB6 771 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 KCTD13Q8WZ19 329 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 UTP4Q969X6 686 aaKnown RBP6.97□□□□□ -1.29
CNOT1-209ENST00000566240 MYRFLQ96LU7 910 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 DUSP23Q9BVJ7 150 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 NKX2-4Q9H2Z4 354 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 TRIM39Q9HCM9 518 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 HOMER2Q9NSB8 354 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 NDOR1Q9UHB4 597 aa6.97□□□□□ -1.29
CNOT1-209ENST00000566240 BLACEA4D250 179 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 RBAK-RBAKDNI3L0D1 243 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 EFCAB14O75071 495 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 DNAJC8O75937 253 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-209ENST00000566240 S100BP04271 92 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-209ENST00000566240 SNRPB2P08579 225 aaKnown RBP6.96□□□□□ -1.3
CNOT1-209ENST00000566240 KCNJ6P48051 423 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 MAP4K2Q12851 820 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 TMC3Q7Z5M5 1100 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 FAM20CQ8IXL6 584 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 DZIP1LQ8IYY4 767 aaKnown RBP6.96□□□□□ -1.3
CNOT1-209ENST00000566240 ARMC10Q8N2F6 343 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 GIMAP7Q8NHV1 300 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 DDX1Q92499 740 aaKnown RBP6.96□□□□□ -1.3
CNOT1-209ENST00000566240 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 ZDHHC15Q96MV8 337 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 DSCC1Q9BVC3 393 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 SLC52A2Q9HAB3 445 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 CYP26B1Q9NR63 512 aa6.96□□□□□ -1.3
CNOT1-209ENST00000566240 SF3B6Q9Y3B4 125 aaKnown RBP6.96□□□□□ -1.3
CNOT1-209ENST00000566240 VAMP4O75379 141 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 LEFTY1O75610 366 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 AMPD2Q01433 879 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 MBTPS1Q14703 1052 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 PAOXQ6QHF9 649 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 BRAPQ7Z569 592 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 TMEM145Q8NBT3 493 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 GSTCDQ8NEC7 633 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 PTPRN2Q92932 1015 aa6.95□□□□□ -1.3
CNOT1-209ENST00000566240 Q96M66 194 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms