RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-214ENST00000566230 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-214ENST00000566230 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
COMMD4-214ENST00000566230 DNAJB2P25686 324 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 IRX5P78411 483 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-214ENST00000566230 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 SIRT2Q8IXJ6 389 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 BOLA2Q9H3K6 86 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 GOPCQ9HD26 462 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 RIPK3Q9Y572 518 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
COMMD4-214ENST00000566230 BDP1A6H8Y1 2624 aa16.08■□□□□ 0.17
COMMD4-214ENST00000566230 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 MYADML2A6NDP7 307 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 DCDC2CA8MYV0 355 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 KCNA10Q16322 511 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-214ENST00000566230 BCL11AQ9H165 835 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 STARD7Q9NQZ5 370 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 TBX21Q9UL17 535 aa16.08■□□□□ 0.16
COMMD4-214ENST00000566230 RAD21O60216 631 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 TIMP1P01033 207 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 ATP5JP18859 108 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 COPB2P35606 906 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 MAMDC4Q6UXC1 1216 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
COMMD4-214ENST00000566230 SYMPKQ92797 1274 aaKnown RBP16.07■□□□□ 0.16
COMMD4-214ENST00000566230 HAUS7Q99871 368 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.16
COMMD4-214ENST00000566230 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 FAM184BQ9ULE4 1060 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 SLC4A4Q9Y6R1 1079 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 MYH4Q9Y623 1939 aa16.07■□□□□ 0.16
COMMD4-214ENST00000566230 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 ADCY6O43306 1168 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 CDK7P50613 346 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
COMMD4-214ENST00000566230 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 SNRNP48Q6IEG0 339 aaKnown RBP16.06■□□□□ 0.16
COMMD4-214ENST00000566230 AMOTL1Q8IY63 956 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 TEX13BQ9BXU2 312 aa16.06■□□□□ 0.16
COMMD4-214ENST00000566230 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
COMMD4-214ENST00000566230 PUS7LQ9H0K6 701 aaKnown RBP16.06■□□□□ 0.16
COMMD4-214ENST00000566230 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 GRXCR1A8MXD5 290 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
COMMD4-214ENST00000566230 HMMRO75330 724 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 RASA1P20936 1047 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 FGD4Q96M96 766 aa16.05■□□□□ 0.16
COMMD4-214ENST00000566230 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-214ENST00000566230 GBF1Q92538 1859 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 ELP1O95163 1332 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 F5H6K3 240 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 RAB11FIP3O75154 756 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-214ENST00000566230 PBX2P40425 430 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 KLRC3Q07444 240 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 TJAP1Q5JTD0 557 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-214ENST00000566230 DDRGK1Q96HY6 314 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
COMMD4-214ENST00000566230 NYAP2Q9P242 653 aa16.04■□□□□ 0.16
COMMD4-214ENST00000566230 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 CTAGE5O15320 804 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 NDUFB10O96000 172 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 ASGR1P07306 291 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
COMMD4-214ENST00000566230 CPXCR1Q8N123 301 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 STK11IPQ8N1F8 1099 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
COMMD4-214ENST00000566230 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 STRBPQ96SI9 672 aaKnown RBP16.03■□□□□ 0.16
COMMD4-214ENST00000566230 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-214ENST00000566230 CHD7Q9P2D1 2997 aa16.03■□□□□ 0.16
COMMD4-214ENST00000566230 GSG1L2A8MUP6 293 aa16.02■□□□□ 0.16
COMMD4-214ENST00000566230 ARVCFO00192 962 aa16.02■□□□□ 0.16
COMMD4-214ENST00000566230 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-214ENST00000566230 CSF2RAP15509 400 aa16.02■□□□□ 0.16
COMMD4-214ENST00000566230 GJA9P57773 515 aa16.02■□□□□ 0.16
COMMD4-214ENST00000566230 PPIGQ13427 754 aaKnown RBP eCLIP16.02■□□□□ 0.162e-6■■■■■ 32.5
COMMD4-214ENST00000566230 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
COMMD4-214ENST00000566230 RAVER2Q9HCJ3 691 aaKnown RBP16.02■□□□□ 0.16
COMMD4-214ENST00000566230 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-214ENST00000566230 MROH7Q68CQ1 1323 aa16.01■□□□□ 0.15
COMMD4-214ENST00000566230 IGKV6D-41A0A0C4DH26 115 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms