RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 FAM47AQ5JRC9 791 aa13.39□□□□□ -0.27
FANCA-219ENST00000566133 ZMYM1Q5SVZ6 1142 aa13.39□□□□□ -0.27
FANCA-219ENST00000566133 SNRNP48Q6IEG0 339 aaKnown RBP13.39□□□□□ -0.27
FANCA-219ENST00000566133 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
FANCA-219ENST00000566133 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
FANCA-219ENST00000566133 NAPBQ9H115 298 aa13.39□□□□□ -0.27
FANCA-219ENST00000566133 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
FANCA-219ENST00000566133 FEM1BQ9UK73 627 aa13.39□□□□□ -0.27
FANCA-219ENST00000566133 PGK1P00558 417 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
FANCA-219ENST00000566133 MX1P20591 662 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 PPARAQ07869 468 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 Q7L0L9 218 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 RNF180Q86T96 592 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 NEDD1Q8NHV4 660 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
FANCA-219ENST00000566133 ZNFX1Q9P2E3 1918 aaKnown RBP13.38□□□□□ -0.27
FANCA-219ENST00000566133 FRMPD3Q5JV73 1810 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 ATP2A1O14983 1001 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 BMP3P12645 472 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
FANCA-219ENST00000566133 ANKRD35Q8N283 1001 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 INCENPQ9NQS7 918 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 PRDM5Q9NQX1 630 aaPredicted RBP13.37□□□□□ -0.27
FANCA-219ENST00000566133 ISY1Q9ULR0 285 aaKnown RBP13.37□□□□□ -0.27
FANCA-219ENST00000566133 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
FANCA-219ENST00000566133 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 ROBO3Q96MS0 1386 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 SNAI1O95863 264 aaPredicted RBP13.36□□□□□ -0.27
FANCA-219ENST00000566133 AKR1A1P14550 325 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 RRP1P56182 461 aaKnown RBP13.36□□□□□ -0.27
FANCA-219ENST00000566133 CCDC129Q6ZRS4 1044 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
FANCA-219ENST00000566133 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 BADQ92934 168 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 SLC38A10Q9HBR0 1119 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 FAM184BQ9ULE4 1060 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 PHF24Q9UPV7 400 aa13.36□□□□□ -0.27
FANCA-219ENST00000566133 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 MCCP23508 829 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 TLE2Q04725 743 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 SNX17Q15036 470 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 C1orf53Q5VUE5 145 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 SH3RF1Q7Z6J0 888 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 CHST13Q8NET6 341 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 FBXO40Q9UH90 709 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 SZT2Q5T011 3432 aa13.35□□□□□ -0.27
FANCA-219ENST00000566133 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 TSPY2A6NKD2 308 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 FDX1P10109 184 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 SLC1A4P43007 532 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 OAZ1P54368 228 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
FANCA-219ENST00000566133 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 SHHQ15465 462 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 TRIM43Q96BQ3 446 aaPredicted RBP13.34□□□□□ -0.27
FANCA-219ENST00000566133 IL17RBQ9NRM6 502 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
FANCA-219ENST00000566133 STX8Q9UNK0 236 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
FANCA-219ENST00000566133 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
FANCA-219ENST00000566133 STAT2P52630 851 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 PDE1AP54750 535 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 KCNA10Q16322 511 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 VPS53Q5VIR6 699 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 RCSD1Q6JBY9 416 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
FANCA-219ENST00000566133 FAM160B2Q86V87 743 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 VTI1AQ96AJ9 217 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 LENG1Q96BZ8 264 aaPredicted RBP13.33□□□□□ -0.28
FANCA-219ENST00000566133 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
FANCA-219ENST00000566133 ABHD16BQ9H3Z7 469 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 PDLIM7Q9NR12 457 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.33□□□□□ -0.28
FANCA-219ENST00000566133 MTMR7Q9Y216 660 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 RANBP2P49792 3224 aaKnown RBP13.33□□□□□ -0.28
FANCA-219ENST00000566133 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
FANCA-219ENST00000566133 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
FANCA-219ENST00000566133 ZNF236Q9UL36 1845 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms