RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 GORABQ5T7V8 394 aa20.37■□□□□ 0.85
CLK3-217ENST00000566126 ARNTL2Q8WYA1 636 aa20.37■□□□□ 0.85
CLK3-217ENST00000566126 UPF3AQ9H1J1 476 aaKnown RBP20.37■□□□□ 0.85
CLK3-217ENST00000566126 LPXNO60711 386 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 FLOT1O75955 427 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 ALADP13716 330 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 GRB10Q13322 594 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 KCTD2Q14681 263 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 CSPP1Q1MSJ5 1256 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 SLC43A3Q8NBI5 491 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 NOC4LQ9BVI4 516 aaKnown RBP20.36■□□□□ 0.85
CLK3-217ENST00000566126 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 ZHX1Q9UKY1 873 aaPredicted RBP20.36■□□□□ 0.85
CLK3-217ENST00000566126 TRIOO75962 3097 aa20.36■□□□□ 0.85
CLK3-217ENST00000566126 MCM3APO60318 1980 aa20.35■□□□□ 0.85
CLK3-217ENST00000566126 CTAGE5O15320 804 aa20.35■□□□□ 0.85
CLK3-217ENST00000566126 GJA9P57773 515 aa20.35■□□□□ 0.85
CLK3-217ENST00000566126 TAP1Q03518 808 aa20.35■□□□□ 0.85
CLK3-217ENST00000566126 RIOX2Q8IUF8 465 aa20.35■□□□□ 0.85
CLK3-217ENST00000566126 ANKS1AQ92625 1134 aa20.35■□□□□ 0.85
CLK3-217ENST00000566126 TTLL4Q14679 1199 aa20.34■□□□□ 0.85
CLK3-217ENST00000566126 GNASQ5JWF2 1037 aa20.34■□□□□ 0.85
CLK3-217ENST00000566126 RPUSD2Q8IZ73 545 aaKnown RBP20.34■□□□□ 0.85
CLK3-217ENST00000566126 MSL3Q8N5Y2 521 aaKnown RBP20.34■□□□□ 0.85
CLK3-217ENST00000566126 ADAMTS5Q9UNA0 930 aa20.34■□□□□ 0.85
CLK3-217ENST00000566126 SCN5AQ14524 2016 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 ZDBF2Q9HCK1 2354 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 UQCRFS1P1P0C7P4 283 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 PLCD1P51178 756 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 SAMD1Q6SPF0 538 aaPredicted RBP20.33■□□□□ 0.85
CLK3-217ENST00000566126 MAMDC4Q6UXC1 1216 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 SPRED2Q7Z698 418 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 SCLYQ96I15 445 aa20.33■□□□□ 0.85
CLK3-217ENST00000566126 CYP2E1P05181 493 aaPredicted RBP20.32■□□□□ 0.84
CLK3-217ENST00000566126 SSTR3P32745 418 aaPredicted RBP20.32■□□□□ 0.84
CLK3-217ENST00000566126 TTC6Q86TZ1 520 aa20.32■□□□□ 0.84
CLK3-217ENST00000566126 SPICE1Q8N0Z3 855 aa20.32■□□□□ 0.84
CLK3-217ENST00000566126 SSH1Q8WYL5 1049 aa20.32■□□□□ 0.84
CLK3-217ENST00000566126 IL9P15248 144 aa20.31■□□□□ 0.84
CLK3-217ENST00000566126 USP5P45974 858 aa20.31■□□□□ 0.84
CLK3-217ENST00000566126 ACVR2BQ13705 512 aa20.31■□□□□ 0.84
CLK3-217ENST00000566126 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.31■□□□□ 0.84
CLK3-217ENST00000566126 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
CLK3-217ENST00000566126 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
CLK3-217ENST00000566126 UBE2ZQ9H832 354 aaPredicted RBP20.31■□□□□ 0.84
CLK3-217ENST00000566126 SPC25Q9HBM1 224 aa20.31■□□□□ 0.84
CLK3-217ENST00000566126 GRIN2DO15399 1336 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.3■□□□□ 0.84
CLK3-217ENST00000566126 POTEB3A0JP26 581 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 ST18O60284 1047 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 STAT3P40763 770 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 NKX3-2P78367 333 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 GABPAQ06546 454 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 POTEBQ6S5H4 581 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 MIGA1Q8NAN2 632 aa20.3■□□□□ 0.84
CLK3-217ENST00000566126 ZNF214Q9UL59 606 aaPredicted RBP20.3■□□□□ 0.84
CLK3-217ENST00000566126 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
CLK3-217ENST00000566126 DCXO43602 365 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 B4GALT4O60513 344 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 CYP7A1P22680 504 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 BEX3Q00994 111 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 EVX2Q03828 476 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 CCDC144BQ3MJ40 725 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 LEXMQ3ZCV2 418 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 CXCL17Q6UXB2 119 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 SIAH1Q8IUQ4 282 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 REPS2Q8NFH8 660 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 PIH1D3Q9NQM4 214 aaKnown RBP20.29■□□□□ 0.84
CLK3-217ENST00000566126 FBXO28Q9NVF7 368 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 PTPRSQ13332 1948 aa20.29■□□□□ 0.84
CLK3-217ENST00000566126 SPTBN4Q9H254 2564 aa20.28■□□□□ 0.84
CLK3-217ENST00000566126 ITGA7Q13683 1181 aa20.28■□□□□ 0.84
CLK3-217ENST00000566126 HFE2Q6ZVN8 426 aa20.28■□□□□ 0.84
CLK3-217ENST00000566126 CLEC10AQ8IUN9 316 aa20.28■□□□□ 0.84
CLK3-217ENST00000566126 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
CLK3-217ENST00000566126 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.28■□□□□ 0.84
CLK3-217ENST00000566126 DNAJC25-GNG10A0A024R161 153 aa20.27■□□□□ 0.84
CLK3-217ENST00000566126 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
CLK3-217ENST00000566126 SLC9A7Q96T83 725 aa20.27■□□□□ 0.84
CLK3-217ENST00000566126 LMCD1Q9NZU5 365 aa20.27■□□□□ 0.84
CLK3-217ENST00000566126 TMX2Q9Y320 296 aa20.27■□□□□ 0.84
CLK3-217ENST00000566126 ASTN1O14525 1302 aa20.27■□□□□ 0.83
CLK3-217ENST00000566126 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 VWA5AO00534 786 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 WDR46O15213 610 aaKnown RBP20.26■□□□□ 0.83
CLK3-217ENST00000566126 PFKMP08237 780 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 FOXK2Q01167 660 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 PHOSPHO2Q8TCD6 241 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 GDPD5Q8WTR4 605 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 FGD4Q96M96 766 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 ABHD16BQ9H3Z7 469 aa20.26■□□□□ 0.83
CLK3-217ENST00000566126 IGSF3O75054 1194 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 KCNA5P22460 613 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 COPB2P35606 906 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 ZAP70P43403 619 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 PTCRAQ6ISU1 281 aaPredicted RBP20.25■□□□□ 0.83
CLK3-217ENST00000566126 DEFB128Q7Z7B8 93 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 ZNF467Q7Z7K2 595 aaPredicted RBP20.25■□□□□ 0.83
CLK3-217ENST00000566126 HERC6Q8IVU3 1022 aa20.25■□□□□ 0.83
CLK3-217ENST00000566126 MEIS3Q99687 375 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms